Raphanus sativus (radish): 108840348
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Entry
108840348 CDS
T06014
Name
(RefSeq) malate synthase, glyoxysomal
KO
K01638
malate synthase [EC:
2.3.3.9
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz00620
Pyruvate metabolism
rsz00630
Glyoxylate and dicarboxylate metabolism
rsz01100
Metabolic pathways
rsz01110
Biosynthesis of secondary metabolites
rsz01200
Carbon metabolism
Module
rsz_M00012
Glyoxylate cycle
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00620 Pyruvate metabolism
108840348
00630 Glyoxylate and dicarboxylate metabolism
108840348
Enzymes [BR:
rsz01000
]
2. Transferases
2.3 Acyltransferases
2.3.3 Acyl groups converted into alkyl groups on transfer
2.3.3.9 malate synthase
108840348
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Motif
Pfam:
MS_TIM-barrel
MS_C
MS_N
HpcH_HpaI
DUF6986
Motif
Other DBs
NCBI-GeneID:
108840348
NCBI-ProteinID:
XP_018468682
UniProt:
A0A6J0M8H4
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Position
2:complement(25349834..25352248)
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AA seq
561 aa
AA seq
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MELETSVYRPNAAVYDSPDGVEVRGRYDQVFAKILTREALGFVAELQREFRGHVRYAMEC
RREAKRRYNSGAVPGFDPSTKFIRDGEWVCASVPPAVADRRVEITGPVERKMIINALNSG
AKVFMADFEDALSPSWENLMKGQVNLKDAVDGTITFHDKARNKVYKLNDQVAKLFVRPRG
WHLPEAHILIDGEPAIGCLVDFGLYFFHNYSKFRQTQGSGYGPFFYLPKMEHSREAKIWN
SVFERAEKMAGIERGSIRATVLIETLPAVFQMNEILYELRDHSVGLNCGRWDYIFSYVKT
FQAHPDRLLPDRVLVGMGQHFMRSYSDLLIRTCHKRGVHAMGGMAAQIPIRDDPKANEMA
LDLVKKDKLREVRAGHDGTWAAHPGLIPICMDAFSHMGKNPNQIKSMKREDATAITEEDL
LQIPRGVRTLDGLRLNTRVGIQYLAAWLTGSGSVPLYNLMEDAATAEISRVQNWQWIRYG
VELNGDGLGVRVSKELFGRVVEEEMERIEKEVGKEKFKKGMYKEACKMFTKQCTAAELDD
FLTLAVYDHIVAHYPINVSRL
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atggagctcgagacctcagtttatcgaccaaacgccgccgtgtatgattcccccgatggt
gtggaggttcgtggacgttacgaccaagtcttcgctaagattctgacaagagaagctctt
ggttttgtagctgagctacagagagagtttcgtgggcatgtgaggtacgccatggagtgc
cgtagagaggcaaaacggcgttacaactctggtgctgtccctgggtttgacccttccact
aagttcatcagagacggtgaatgggtttgtgcctctgtccctcccgctgttgctgaccgg
agagttgagataaccggtccggtcgagaggaagatgatcatcaatgctcttaactctgga
gctaaagtcttcatggcagattttgaggatgcactgtctccaagctgggagaatctgatg
aaagggcaagtgaacttgaaagatgcagtggatggaaccattacgtttcacgacaaggca
aggaacaaagtttacaagctcaacgaccaagttgctaagctctttgtcaggccacgtggt
tggcatcttccggaggctcacatcctcatcgacggtgaaccagccattggttgtctcgtc
gacttcggtctttacttcttccacaactactccaagtttagacagactcaaggttccggt
tatggacccttcttctatcttcccaaaatggaacattctagggaagcaaagatctggaac
agtgtgtttgagcgagctgagaagatggctggtatagagcgaggaagcattagagccacc
gtgctgatcgagaccctcccggctgttttccagatgaatgagattttatacgagctgcgt
gatcattcggtgggtctgaactgtggaagatgggattatatctttagctatgtcaagacc
ttccaggctcaccctgaccgcctcttaccagaccgcgtccttgtcggtatgggccagcat
ttcatgaggagttactctgatcttctcattcgtacttgtcacaagcgtggtgtccacgcc
atgggcggcatggctgctcagattccgataagagatgacccgaaagcgaatgagatggca
ttggacctagtgaagaaagacaagctaagggaagtaagagcaggacatgatgggacatgg
gctgctcatccaggacttatcccaatctgcatggatgcattcagccacatggggaaaaat
ccaaaccaaatcaaatcaatgaagcgagaggacgcaactgctataacagaggaagatctg
cttcagatacctagaggagtacgaacactggacggtctaaggctgaacacacgtgtgggg
atccaatacttagccgcgtggctaacaggatcaggatctgtcccactctataacctgatg
gaagatgcagctacggccgagataagccgtgtccaaaactggcagtggattaggtatgga
gtggagttgaacggagacgggcttggagttagggtgagcaaagagttgtttgggagagtt
gtggaagaagagatggaaagaatcgagaaagaagttgggaaagagaagtttaagaaagga
atgtataaggaagcttgcaagatgtttacaaagcagtgtactgccgctgagcttgatgat
tttcttacacttgctgtttatgatcatattgtagctcattacccaatcaatgtgtcaagg
ctctga
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