Raphanus sativus (radish): 108840408
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Entry
108840408 CDS
T06014
Name
(RefSeq) transcription factor RAX1
KO
K09422
transcription factor MYB, plant
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rsz03000
]
108840408
Transcription factors [BR:
rsz03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
108840408
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
108840408
NCBI-ProteinID:
XP_018468741
UniProt:
A0A6J0MB22
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Position
2:20576885..20578487
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AA seq
329 aa
AA seq
DB search
MGRAPCCDKTKVKRGPWSPEEDSKLRGYIEKYGNGGNWISFPLKAGLRRCGKSCRLRWLN
YLRPNIKHGDFSEEEDMIIFSLFAAIGSRWSIIAAHLPGRTDNDIKNYWNTKLRKKLMSS
SSSSHSSSAMAPPFLNPNSQVVKRPSTTISPSSYNPYFENPTKALISNNDCFEADNHQIF
PFVKTNYPQGLSLPESNNNNISATSGFSLNHNMCDYYSNHNSFSSDANGNRSEIMMKQEE
IMMLMMIDNHIDQRTKGYNGDFTQGYYSNYINGHGNLKQMISGTGTNSNINMGGSGSESA
SSTSSISNLAENKSSGSLLQHKCLPYFYS
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgggaagggctccatgttgcgacaagacaaaggtgaagagagggccttggtctcctgag
gaagactctaagcttagaggttacattgagaagtatggtaatggtggaaattggatctct
tttcctctcaaagccggtttgaggagatgtgggaagagttgtagattgaggtggctaaac
tacttgagaccaaacataaaacatggtgacttctctgaggaagaagatatgatcattttc
agcctctttgctgccatcggaagcagatggtcaataatagcagctcatctacccggaaga
acagacaacgacatcaaaaactattggaacacaaagctaaggaagaaactcatgtcttct
tcttcttcttctcattcatcatcagccatggctcctccttttctaaaccctaattctcag
gttgtgaaaagaccatcaaccacaatttcaccttcttcctacaatccgtattttgaaaac
ccaacaaaagctctcatctccaacaacgattgctttgaagctgataaccaccagatcttt
ccctttgttaagactaattatcctcaaggtctctctctaccagagagtaacaacaacaac
atttcggccacaagtggtttctcgctcaaccacaatatgtgtgattactacagcaaccac
aacagtttctcctcagacgctaatggaaatagatcagagattatgatgaagcaagaagag
atcatgatgttgatgatgatagacaaccacattgaccagaggacaaaagggtacaatgga
gatttcacacagggatattacagtaactacattaatggacatgggaatttgaagcaaatg
attagtggaacaggcactaattctaacataaacatgggtggttcaggttcagaatcagct
tcatctactagttccataagcaacctagctgagaacaaaagcagtggtagcctcctacaa
cacaagtgtttgccctatttctactcctag
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