Raphanus sativus (radish): 108840612
Help
Entry
108840612 CDS
T06014
Name
(RefSeq) protein DAMAGED DNA-BINDING 2
KO
K10140
DNA damage-binding protein 2
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03420
Nucleotide excision repair
rsz04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
108840612
09124 Replication and repair
03420 Nucleotide excision repair
108840612
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rsz04121
]
108840612
03400 DNA repair and recombination proteins [BR:
rsz03400
]
108840612
Ubiquitin system [BR:
rsz04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
108840612
DNA repair and recombination proteins [BR:
rsz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
108840612
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EIPR1
Beta-prop_EML
Beta-prop_RIG_2nd
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
Beta-prop_TEP1_2nd
EIF3I
WD_LRWD1
Beta-prop_WDR90_POC16_2nd
WD40_RFWD3
Beta-prop_IFT140_1st
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
108840612
NCBI-ProteinID:
XP_018468947
UniProt:
A0A6J0M995
LinkDB
All DBs
Position
2:21587055..21590361
Genome browser
AA seq
553 aa
AA seq
DB search
MGLTRNRRKTEPEIVIARDSESSSSEEEEEEEEDDYPLSESEKEDEAVKIELEKSKAKGK
APITVKLKKVCKVCKQPGHEAGFKGATYIDCPMKPCFLCKMPGHTTMSCPHRVVTDHGIL
PTSHRNTKNPIDFVFMRQLQPRIPPIKPPYVIPDQVHCAVIRYHSRRVTCLEFHPTRNNI
LLSGDKKGQIGVWDFAKVYEKSVYGNIHTVQVNNMRFSPTNDDMVYSASSDGKVGYTDLE
TGTSSTLLNLNPNGWQGPTTWNMLYGLDINSDKGLVLAADNFGLLHMIDHRSNNVTGEPI
LIHKKGSKVVGLDCNPVHPELLLSCGNDHFARIWDMRKLQPGESLNDLAHKRVVNSAYFS
PSSGTKILTTSQDNRIRVWDSIFGNLDSPSREIVHSHDFNRHLTPFKAEWDPKDTSESLI
VVGRYISENYNGAALHPIDFIDSSNGQLVAEVMDPNITTITPVNKLHPRDDVLASGSSRS
LFIWRPQEKTEMVEEEKKEKKIVICYGDGNKKGKKQKRGSDDEDDDDDMFSSSKGKNIKS
QAKTTKSTRRKKA
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgggtttaacgaggaacagaagaaaaacggaaccagaaatcgtcattgccagggattca
gagtcaagttcgtccgaagaggaagaggaagaggaagaagatgattaccctttgtcggag
tctgagaaagaagatgaagcggttaaaatcgaattagagaagagtaaagcaaaagggaaa
gcacccattaccgttaagctcaagaaagtttgcaaagtctgtaaacagcctggtcatgaa
gctggatttaaaggagcaacttatatagattgtcctatgaaaccttgcttcttatgcaaa
atgcctggccacaccacaatgtcgtgtccccatagagtggttactgatcacgggatactc
ccaacttctcataggaatacaaagaaccctattgactttgtgtttatgcgtcagctccaa
ccgaggattccaccgattaaaccaccgtatgtgataccagatcaagtgcattgtgcagtt
attcgataccacagcagacgtgttacgtgtctggagttccatccaacaaggaacaacatt
cttctctctggagataagaaagggcaaattggagtgtgggattttgctaaagtgtatgag
aagagtgtgtacggaaacatacacactgtacaagtgaataatatgcgatttagtcccaca
aatgatgacatggtttattctgcatcctctgatggaaaagttggttatactgatctggaa
actggaacttcatcaactctgctgaatctaaaccccaatggatggcagggcccaactact
tggaacatgctgtacggtttggatataaactcggataaaggtttggtgctagctgctgat
aatttcggattgcttcacatgatcgaccatcggtcaaataacgtaacgggcgagcccatt
ttgatacacaagaaaggtagcaaagttgttggccttgactgcaacccggttcaccctgag
cttcttcttagctgtggaaacgatcattttgctagaatctgggatatgcgtaaactacaa
cctggagaatctcttaatgatcttgcgcacaagcgagtagtcaactctgcttatttctct
ccatcatcaggcacaaagatactcacaacctctcaggacaaccgtattcgagtatgggac
tccatctttgggaacttggattcgccaagccgagagattgttcatagccatgatttcaat
aggcatttgacaccgttcaaagctgaatgggatcctaaggatacctcggagtcactaatt
gtggttggtcgttacattagtgaaaactacaacggagcagctcttcacccgatagacttc
attgattcaagcaatggacagttggttgcagaggtcatggatccgaacataacgactatt
actccagtcaacaagttgcatccgcgcgatgatgttttagcctcaggaagctcaaggtcg
ctgttcatttggcggccacaggagaaaacagagatggtggaggaagagaagaaggagaag
aagattgttatatgttatggtgacggcaataagaaaggaaaaaagcaaaagcgtggcagc
gatgatgaagatgatgacgacgatatgtttagtagctctaagggcaaaaacataaagtct
caagccaaaacaaccaaatctactcgcaggaaaaaggcttaa
DBGET
integrated database retrieval system