KEGG   Raphanus sativus (radish): 108840612
Entry
108840612         CDS       T06014                                 
Name
(RefSeq) protein DAMAGED DNA-BINDING 2
  KO
K10140  DNA damage-binding protein 2
Organism
rsz  Raphanus sativus (radish)
Pathway
rsz03420  Nucleotide excision repair
rsz04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    108840612
  09124 Replication and repair
   03420 Nucleotide excision repair
    108840612
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rsz04121]
    108840612
   03400 DNA repair and recombination proteins [BR:rsz03400]
    108840612
Ubiquitin system [BR:rsz04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     108840612
DNA repair and recombination proteins [BR:rsz03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      108840612
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz Beta-prop_EIPR1 Beta-prop_EML Beta-prop_RIG_2nd Beta-prop_EML_2 WD40_WDHD1_1st WDR55 Beta-prop_TEP1_2nd EIF3I WD_LRWD1 Beta-prop_WDR90_POC16_2nd WD40_RFWD3 Beta-prop_IFT140_1st Beta-prop_NUP159_NUP214
Other DBs
NCBI-GeneID: 108840612
NCBI-ProteinID: XP_018468947
UniProt: A0A6J0M995
LinkDB
Position
2:21587055..21590361
AA seq 553 aa
MGLTRNRRKTEPEIVIARDSESSSSEEEEEEEEDDYPLSESEKEDEAVKIELEKSKAKGK
APITVKLKKVCKVCKQPGHEAGFKGATYIDCPMKPCFLCKMPGHTTMSCPHRVVTDHGIL
PTSHRNTKNPIDFVFMRQLQPRIPPIKPPYVIPDQVHCAVIRYHSRRVTCLEFHPTRNNI
LLSGDKKGQIGVWDFAKVYEKSVYGNIHTVQVNNMRFSPTNDDMVYSASSDGKVGYTDLE
TGTSSTLLNLNPNGWQGPTTWNMLYGLDINSDKGLVLAADNFGLLHMIDHRSNNVTGEPI
LIHKKGSKVVGLDCNPVHPELLLSCGNDHFARIWDMRKLQPGESLNDLAHKRVVNSAYFS
PSSGTKILTTSQDNRIRVWDSIFGNLDSPSREIVHSHDFNRHLTPFKAEWDPKDTSESLI
VVGRYISENYNGAALHPIDFIDSSNGQLVAEVMDPNITTITPVNKLHPRDDVLASGSSRS
LFIWRPQEKTEMVEEEKKEKKIVICYGDGNKKGKKQKRGSDDEDDDDDMFSSSKGKNIKS
QAKTTKSTRRKKA
NT seq 1662 nt   +upstreamnt  +downstreamnt
atgggtttaacgaggaacagaagaaaaacggaaccagaaatcgtcattgccagggattca
gagtcaagttcgtccgaagaggaagaggaagaggaagaagatgattaccctttgtcggag
tctgagaaagaagatgaagcggttaaaatcgaattagagaagagtaaagcaaaagggaaa
gcacccattaccgttaagctcaagaaagtttgcaaagtctgtaaacagcctggtcatgaa
gctggatttaaaggagcaacttatatagattgtcctatgaaaccttgcttcttatgcaaa
atgcctggccacaccacaatgtcgtgtccccatagagtggttactgatcacgggatactc
ccaacttctcataggaatacaaagaaccctattgactttgtgtttatgcgtcagctccaa
ccgaggattccaccgattaaaccaccgtatgtgataccagatcaagtgcattgtgcagtt
attcgataccacagcagacgtgttacgtgtctggagttccatccaacaaggaacaacatt
cttctctctggagataagaaagggcaaattggagtgtgggattttgctaaagtgtatgag
aagagtgtgtacggaaacatacacactgtacaagtgaataatatgcgatttagtcccaca
aatgatgacatggtttattctgcatcctctgatggaaaagttggttatactgatctggaa
actggaacttcatcaactctgctgaatctaaaccccaatggatggcagggcccaactact
tggaacatgctgtacggtttggatataaactcggataaaggtttggtgctagctgctgat
aatttcggattgcttcacatgatcgaccatcggtcaaataacgtaacgggcgagcccatt
ttgatacacaagaaaggtagcaaagttgttggccttgactgcaacccggttcaccctgag
cttcttcttagctgtggaaacgatcattttgctagaatctgggatatgcgtaaactacaa
cctggagaatctcttaatgatcttgcgcacaagcgagtagtcaactctgcttatttctct
ccatcatcaggcacaaagatactcacaacctctcaggacaaccgtattcgagtatgggac
tccatctttgggaacttggattcgccaagccgagagattgttcatagccatgatttcaat
aggcatttgacaccgttcaaagctgaatgggatcctaaggatacctcggagtcactaatt
gtggttggtcgttacattagtgaaaactacaacggagcagctcttcacccgatagacttc
attgattcaagcaatggacagttggttgcagaggtcatggatccgaacataacgactatt
actccagtcaacaagttgcatccgcgcgatgatgttttagcctcaggaagctcaaggtcg
ctgttcatttggcggccacaggagaaaacagagatggtggaggaagagaagaaggagaag
aagattgttatatgttatggtgacggcaataagaaaggaaaaaagcaaaagcgtggcagc
gatgatgaagatgatgacgacgatatgtttagtagctctaagggcaaaaacataaagtct
caagccaaaacaaccaaatctactcgcaggaaaaaggcttaa

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