Raphanus sativus (radish): 108841011
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Entry
108841011 CDS
T06014
Name
(RefSeq) ABC transporter B family member 14
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
108841011
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rsz02000
]
108841011
04147 Exosome [BR:
rsz04147
]
108841011
04090 CD molecules [BR:
rsz04090
]
108841011
Enzymes [BR:
rsz01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
108841011
Transporters [BR:
rsz02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
108841011
Exosome [BR:
rsz04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
108841011
CD molecules [BR:
rsz04090
]
Proteins
108841011
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
AAA_22
AAA_16
ABC_ATPase
RsgA_GTPase
Zeta_toxin
AAA_30
AAA_15
AAA
nSTAND1
AAA_23
P-loop_TraG
DEAD
DUF87
Motif
Other DBs
NCBI-GeneID:
108841011
NCBI-ProteinID:
XP_018469307
UniProt:
A0A6J0MAA4
LinkDB
All DBs
Position
1:11928743..11936087
Genome browser
AA seq
1243 aa
AA seq
DB search
MDNIKSSSNGNMQTDREARKEEKKKMKKESVSLMGLFSAADKVDYVLMFLGTFGTCIHGG
TLPLFFVFFGKMLDSLGNLSTDSTAISSRVSQNALYLVYLGLVNLVSAWMGVACWMQTGE
RQTARLRINYLKSILAKDISFFDTEARDSNFIFHISSDAILVQDAIGDKTGHVLRYLCQF
IAGFVIGFLSVWQLTLLTLAVVPLIAIAGGGYAIVMSTISEKSEAAYADAGKVAEEVLSQ
VRTVYAYVGEEKAVNSYSRSLTKALKLGKRSGLAKGLGVGLTYGLLFCAWALLFWYASLL
VRHGKTNGAKAFTTILNVIYSGFSLGQAAPSLSAIAKGRVAAENIFRMIGNNNLESSERF
KDGTILQNVAGRIDFHQVYFAYPSRPNMVFENLSFSISSGKTFAFVGPSGSGKSTIISMV
QRFYEPKSGEILLDGKDIKNLKLKWLREQMGLVSQEPALFATTIASNILIGKEDAHMDQV
IEAAKAANADNFIKSLPDGYNTQVGEGGTQLSGGQKQRIAIARAVLKSPKILLLDEATSA
LDAESEKIVQQALDNVIEKRTTIVIAHRLSTIRNVDKILLLRNGQVIETGSHAELMSRGG
DYANLVNSQETNPQSIMMESCKSQSGSLSSRRVASSRRTSSFRDDQEMTDEKDSNQEILS
SSSMVWELIKLNAPEWPHALLGSIGAVLAGAQPALFSIGIAYVLNAFYSPFPSVIKREVE
KVSIVFVGVGVVTPLIYLLQHYFYTLMGERLTSRVRLSLFSAVLSNEIGWFDMEDNDTGS
LTSILAADATLVRSALADRLSTIVQNFSLTFTALAVAFFYSWRVAAVVTACFPILIAASL
TEQLFLKGFGGDYTRAYSKATSVAREAITNIRTVASFGAEKTISEQFACELSKPTKNAFL
RGHISGFGYGLSQCLAFCSYALGLWYISVLIKRKETNFADSIKSFMVLLVTAYSVAETLA
LTPDIVKGTQALRSVFRVLHRETEIHPDQPNSISVTQIKGDIEFRNVGFAYPARLDIPIF
QNLNLRVSAGKSLAVVGPSGSGKSTVIGLIMRFYDVNYGNVCIDGQDIKTLNLRSLRKKL
ALVQQEPALFSTTIYENIKYGNENASEAEIIEAAKAANAHEFISRMEEGYKTHVGEKGVQ
LSGGQKQRVAIARAVLKDPSVLLLDEATSALDTTSEKLVQEALDKLMKGRTTVVVAHRLS
TIRNADTIAVLHKGRVVEKGSHRELVSKSDGFYKKLTSLQEVM
NT seq
3732 nt
NT seq
+upstream
nt +downstream
nt
atggataatataaagtcatcctctaacggaaacatgcagaccgatagggaagcaaggaag
gaggagaagaaaaagatgaagaaagaatcagtgtccctgatgggtttgtttagcgcagca
gataaagttgattacgttttgatgttcctaggcactttcgggacgtgtattcatggtggt
acgcttccactcttcttcgtgttcttcgggaaaatgctagattctcttggcaatctctct
acagattctacagccatatcttctcgagtttcacagaatgctttgtacttggtctactta
gggttggtcaacttggtatcagcctggatgggagttgcttgttggatgcaaacaggggaa
agacaaacagctagattgcgtataaattatctcaaatcaattttagcaaaagacattagt
ttctttgatacagaagctagagattcaaattttattttccacatctcaagtgacgccata
ttggttcaagatgcaattggcgacaagacaggccatgttctgcgttacctatgtcagttc
atcgctgggtttgtgatcggttttttgtcggtatggcaacttacgttgctcacgttagca
gtggttccattgatagccatcgcaggaggagggtatgccatagtaatgtcgacaatctct
gagaagagtgaagctgcttatgctgatgcaggaaaagtcgcagaagaggttttgtcacaa
gtgagaactgtgtatgcatatgtgggagaagaaaaagctgtaaattcttactcaagatct
ctcacgaaagctctgaaacttggtaaaagaagtggtcttgctaaaggcttaggagttgga
ttaacatatggtctcttgttttgtgcttgggctttgcttttctggtatgctagtttgctt
gtacgccacggcaaaacaaacggtgcaaaagccttcacaacgatcctcaatgtcatttac
agcggattctccttaggtcaagccgcacctagcttatcagcgattgctaaaggcagagtt
gctgctgaaaatatattcagaatgataggaaacaacaatcttgaaagttctgaaagattc
aaagatgggaccattttgcaaaacgtagctgggaggattgactttcatcaagtttatttc
gcttatccttccagaccaaacatggtttttgagaatctgagtttcagtataagttcaggc
aagacatttgcatttgtcggtccaagtggttcagggaaaagcacaatcatatcaatggtt
caacgcttctatgaacccaagtccggagagattctcctggatggtaaagacatcaagaac
ttgaagctgaaatggttgagggagcagatgggtttagtgagccaagaaccagcattattc
gccacgacaatagcctcgaatattcttatcggtaaagaggatgcacatatggatcaggtt
atagaagctgctaaagcagccaacgcagataatttcattaaatcattacccgatggttac
aatactcaggttggagaaggaggaactcagctctcaggaggacagaagcagaggattgca
attgctcgagcggttctaaaaagtccaaagatattactcttagatgaagcaacaagcgca
cttgatgcagaatcagagaagattgtgcagcaagcactcgacaatgttatagagaaaaga
acaacaatcgtcattgcacacagattatcaaccatcagaaatgttgacaagattcttcta
ctgagaaatggtcaagttatcgaaaccggtagccacgcagaactgatgtcaagaggagga
gattacgctaatctcgtgaattcccaagagacaaatcctcaatccattatgatggaatct
tgtaaatctcaatctggatctttaagttcaagaagggttgctagttcaagaaggacttca
agctttagggatgatcaagaaatgacggatgaaaaagattcaaatcaagaaattttaagc
tcgtcttctatggtatgggaacttataaagctaaatgctccagagtggcctcatgcatta
cttggctcaattggtgcagttcttgctggagcacaaccagcattattctccatagggatt
gcttacgtgctcaacgcgttttattcaccttttccaagtgtgattaagcgtgaagtcgag
aaggtatctattgtcttcgttggcgttggagttgtaacacctctcatatatctcctccaa
cattacttctatacacttatgggggagcgtctaacatctcgggttcgcttatccttattc
tcagcggttctttcgaatgagatcggttggttcgatatggaagataacgacactggctca
ctcacttcaatcttagctgctgatgcaacgttggtgaggagtgctctagcggatcgcctc
tcgacaatagtccaaaacttctctctcacattcacagcactagcagttgccttcttctac
agttggcgtgtcgcagctgttgtgactgcttgtttccctattctcattgctgcttcactt
accgagcaattgtttctaaagggttttggaggagattacacaagggcttactctaaagca
acttcagtggcgcgtgaagctattacgaatataagaactgtggcttcgtttggtgctgaa
aagacgatctcggaacagtttgcttgtgagctaagcaaacccaccaaaaatgcctttctc
agaggtcatatctctggatttggatacggcttgtctcaatgtctcgcgttctgttcctac
gctcttggtctctggtacatttcagttttgatcaagaggaaggagacgaactttgcggat
agtatcaaatctttcatggttttgcttgtcacggcttactcggtagcggaaacgcttgct
ttgacaccagatatcgtgaagggcacgcaagcactcaggtcggtttttagggttttacat
agagagactgagatacatccagaccagcctaactcaatatcggtcactcagattaaagga
gatattgagtttagaaacgtgggctttgcgtaccccgcaagacttgatatccccattttc
caaaacctaaacctaagagtctcagccgggaaaagtcttgcggttgttggacctagtggc
tcaggaaagagcacggtgattggattgatcatgagattctacgatgtgaactacggtaat
gtctgcatcgatgggcaagacataaaaaccctaaacctacgtagcttgcggaagaagcta
gcgttggtccagcaagaaccagctctgttttcaacgaccatttacgagaacatcaagtac
gggaacgagaacgcttcggaggcagagataatcgaagccgcgaaagctgcgaacgcgcac
gagttcataagcaggatggaagaagggtacaagacgcacgtgggtgaaaagggagtgcag
ttatcaggtggtcagaaacagagagtggccatcgcgagggcggttctaaaggatccttca
gtgcttctccttgatgaggcaacgagtgctttggacacgacctcggagaaacttgtccaa
gaggcgcttgacaagcttatgaagggaagaaccacggtggtggttgctcataggctctcg
accataagaaacgccgacacgatcgctgtcttgcacaaaggaagagttgtggagaaggga
agtcatcgagagcttgtttctaagtccgatggattttataagaaattgacgagtcttcaa
gaagtgatgtaa
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integrated database retrieval system
