Raphanus sativus (radish): 108841100
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Entry
108841100 CDS
T06014
Name
(RefSeq) probable E3 ubiquitin ligase SUD1
KO
K10661
E3 ubiquitin-protein ligase MARCH6 [EC:
2.3.2.27
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
108841100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rsz04121
]
108841100
Enzymes [BR:
rsz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108841100
Ubiquitin system [BR:
rsz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
March proteins
108841100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MARCHF6_C
RINGv
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
108841100
NCBI-ProteinID:
XP_018469382
UniProt:
A0A6J0MAG9
LinkDB
All DBs
Position
Unknown
AA seq
850 aa
AA seq
DB search
METGNKEAVQTEATDMKNEDVDICRICQSPEEESDNPLRHPCACRGSLKYVHTDCIFLWI
NRRSRRKYCEICKRSYSILPVYSDNAPERLPSQELLKSVLLRAFRFMALILPWLLAIAFH
SHCILFLLADKETEFENKIVFELSCFFLGLLYTVEIVTEITFIVVLRVIYEETARTEPEL
LNHVHLIANGLRHKGVTKILLLLWKYMRILCDWWHDQLLHLSFFHDMFMRGPLALAFVPR
NTQLHEFGSIRRFLFFSDDNTFAVLAINISWSFLDYLLPYLIGKAVFVLLLCLPPHGWIL
ENISEITVGHIVLLSVWLAYLKSVFFTLIRNPTRTRWFSLSVKDALILCFKTILLPWMLG
CWIDFCTFPLTGTTLSQRLEVVSDYPFMAVKHWCVGIGYLLAALSCMKLIQEIVQKRAFW
YLLDVTEPNYKTTKLHLRSLLFAFAFHGAVIVIVFHLPIKTITLISHSFFPLKFGVYKDE
FMLGLLAAYICCLMRLAKSVKQSIKPIVHKWVIAVSSCLKLSDFLFGVVLQRRDVVNHNV
RLAFGIAEGCMVSFYGPQSDTTDEEEDTNEQSDERFVLRIGMMLVLAALSMFLVSTTVMA
LPVLAGRAFFHSISFYMLSFGLEHDDICAFWIGLCIMRKIYKITCFVYDHVVTRRIDLLF
NHVLKCIQNVLLFSIRIFVVPGLLGLLIDLMIIIPSQVSLDELPVYNFLHDWLIGVCVLH
ILIFLTMSTPVTCFATVAWCEKLQIIRSVGINHLPFTWLIQDVIGSAINTLLTTLCVPYV
LVNNSLFPVLGFSRETNLTVQRFVWPVLLAVMVIWFSAKLTRDLIIYIHQVEFDNRYKVG
ERLVDFTEDL
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
atggagacaggaaacaaagaagctgttcagacagaagcaacagacatgaaaaacgaagat
gtagacatttgcaggatttgccaatcaccggaggaggaatcagacaatccgttgaggcat
ccttgtgcatgtcgtggctctctcaagtacgtccacacagactgtatctttctctggatc
aatcgtcgtagtagacgcaagtactgcgagatttgtaaacgtagctactcaatccttccg
gtttattccgacaacgctccagagagacttccatctcaggagttattaaagagcgtacta
ctgagagcatttcgtttcatggctctgatccttccatggctcttggcgattgctttccac
tcacactgcattctgtttcttcttgcggacaaggaaactgagtttgagaacaagatagtt
tttgaactgtcgtgtttctttcttggtcttctttacacagtcgagatagtgactgaaatc
actttcattgttgttctgagggtaatctatgaagagactgcaaggacagaacccgagttg
ttaaaccatgtgcatctcatagcgaatggcttaagacataagggtgttaccaagattctg
cttttgttgtggaagtatatgaggattctgtgtgattggtggcatgatcagctcttgcac
ttatccttcttccacgacatgtttatgagaggacctctggcacttgcgtttgttcctaga
aacacacagctccatgagtttggatccataaggaggtttcttttcttctccgatgacaac
acttttgctgttcttgccatcaatatctcttggtctttcctagactatctgttaccatat
ttgattggcaaagctgtctttgtgctcctactctgtctcccaccacacggatggatttta
gaaaacatatctgagatcacagttggacatatagttctactctcagtttggttggcttac
cttaagagcgtcttcttcactctgattcggaatccaaccagaacaagatggttttcactc
tcagttaaagatgcattgatcctgtgtttcaaaaccatccttctgccttggatgcttggt
tgctggatagatttctgcacattccctcttaccggaacaacactttcacaaaggctcgag
gttgtttcggactatccattcatggctgtcaaacattggtgtgtaggaatagggtacttg
ctagctgctttatcttgcatgaagcttatccaggagattgttcagaaacgtgccttttgg
tacctcttagatgtcacagaaccaaactacaaaaccaccaaactgcatctccgttcctta
ctctttgcgttcgctttccatggagcagtgatagtgattgtgtttcacttgcctataaag
acaatcactctcatcagccactcctttttccctctcaaatttggagtctacaaggatgaa
tttatgcttggcttactcgctgcttatatatgctgcctcatgcggttagccaagtctgtt
aaacaatccatcaaaccaatagttcacaagtgggttattgctgtcagctcttgcctcaag
ttaagtgatttcttgtttggagtagtactccaaagaagagacgttgtgaatcataatgtg
agactagcgtttggcatcgctgaaggctgtatggtgagcttttatggacctcagagcgat
accaccgatgaagaagaggatacaaacgagcaaagtgatgaaaggtttgtgctgaggatt
ggaatgatgctggttctagctgcattgagtatgtttcttgttagtacgacagtcatggct
ttaccagttctggctggaagggccttcttccactctatctctttctacatgctaagtttc
ggactcgaacacgatgatatttgtgctttctggattggattgtgtatcatgcgaaaaatc
tataagatcacctgcttcgtctatgatcatgtcgtgacgagaagaatcgatttgcttttc
aaccatgtactgaagtgcattcagaatgtcttactgttctctataaggatctttgttgtg
cctggattgcttggtctccttatcgaccttatgatcatcattccatcacaagtttctcta
gacgaattacctgtgtataactttctccacgattggttgatcggtgtgtgtgtacttcac
atattgatcttcttgactatgtccacaccagtcacctgcttcgcgacggttgcatggtgt
gaaaagcttcaaataataagaagcgtgggtatcaaccatcttcctttcacatggctcatt
caagatgttatcggctcagccataaacacgctcctaaccactctctgcgtcccttacgtg
ctggtgaacaactctctgttccctgttcttggattctcacgtgaaaccaacttaaccgtc
caacggttcgtttggccggtgttgctagccgtgatggtcatatggtttagtgccaaactc
actcgtgacctcatcatctacattcaccaagtggaatttgataaccgatacaaagtgggg
gagaggttggtcgatttcactgaagatctctga
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