Raphanus sativus (radish): 108841393
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Entry
108841393 CDS
T06014
Name
(RefSeq) protein NPGR2
KO
K21843
tetratricopeptide repeat protein 7
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rsz04131
]
108841393
Membrane trafficking [BR:
rsz04131
]
Endocytosis
Others
EFR3-PI4KIII alpha complex and associated proteins
108841393
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_19
TPR_16
TPR_1
TPR_8
TPR_11
ARM_TT21
TPR_CcmH_CycH
TPR_12
TPR_14
TPR_9
TTC7_N
Motif
Other DBs
NCBI-GeneID:
108841393
NCBI-ProteinID:
XP_018469650
UniProt:
A0A6J0MAT4
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All DBs
Position
2:35186959..35190342
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AA seq
738 aa
AA seq
DB search
MRKSEIRPPPAEKLHLHSRLRQRLRKIRMKCLCSGEQMRLIEEEDKRSELGVSSALSAAE
SETAKKLDNGNIEEAELSLRETSSLNYEEARALLGRIEYQKGNIEAALRVFEGIDISGIT
IKMKTALTAREEKRHRRRSKGSFVTPPQPPMSKHAVSLLFEAIFLKAKSLQRLGRFQEAA
QSCRVILDIVEASVSEGASENVTGDIKLQETLAKAVELLPQLWKLAESPRDAILSYRRAL
LNHWKLDPETTARIQKEYAVFLLYSGEEAVPPNLRSQTEGSFIPRNNVEEAILLLMLLLR
KVNQKRITWDAAILDHLTFALTIAGDLTALAKQLEELSPEILDQRELYYTLSLCYHGAGE
GLVALGLLRKLFSEKEDPNRISGLLMASKICGERPGLAEEGLDYARRAIGDLGNECVQLD
GAARLVLGIALTESSRKTATEAERVARQSEGMQALACGDMTDPRVVHRLALENAEQRKLD
SALVYAKQALKLGAESDLEVWLLLARVLSAQKRFSDAETIVDAALNETGKWEQGKLLRLK
AKLRLAKGEVKDTIKSYTELLALLQVQSKSFSSSKKQLPKGYVEGLRSLELGTWHDLAHI
YIDLSQWRDAETCLSRSRLIAPYSPVRYHTEGVLCKRQGQLEEAMEAFTTALDMDPMHVP
SLISKAEVLLELGNRSSIAVVRSFLMEALRIDRLNQSAWYNLGKMFKAEGSVSSKQEAVE
CFQAAVALEETMPVEPFR
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgaggaagagcgagattaggccgccgcctgctgagaagttgcatttacatagtagacta
agacaacgtttaaggaagatcagaatgaagtgtttgtgttccggtgaacagatgagactc
atcgaggaagaagacaagcggtccgagcttggtgttagctcagctttatcagctgctgag
agcgagactgccaagaagcttgataacggcaacatcgaagaagctgagttgtctctgcgt
gagactagttctttgaactacgaggaggcgagggcacttttgggaagaatagagtatcag
aaagggaacatagaggcggcattgagagtctttgaagggattgatatcagtgggatcact
ataaagatgaaaaccgctttaaccgctagagaagaaaaaagacatagaagacgttccaaa
ggcagctttgtgactcctcctcagcctcccatgtctaaacacgctgttagtttgcttttc
gaagctatcttcctcaaagccaaatctctccagcgtcttggaaggttccaagaagctgcg
cagtcttgcagagttattctcgatatagtagaggcttctgtatcagaaggcgcgtcagag
aatgtcactggtgacatcaagttgcaggagacgctagccaaagcggttgagctgcttcct
cagctgtggaagcttgctgagtcgccacgcgatgctattctgtcttacagacgagcgctt
ctcaatcactggaagctagatcctgaaaccacagcgaggatacagaaagagtacgccgtg
tttcttctctactccggcgaagaagccgtgccgcctaacctgcgttctcagaccgaaggc
tctttcatcccgaggaacaacgtggaagaagctatccttcttctcatgttacttctcagg
aaagttaaccagaagagaatcacatgggatgcagcgatcttggaccatctcaccttcgct
ctcacgatcgcaggcgacttaaccgctcttgctaagcaacttgaagagcttagccccgag
atattggaccagagggagctttattatacattgtctttgtgttaccacggtgcaggggaa
ggtctggtggcgctcggtttactgaggaagctattctcagagaaagaggatccaaaccgg
atatccggtttgcttatggcttccaagatatgtggtgagagacctggtctcgctgaggaa
gggttagactatgctcgtagagcgataggagacttggggaacgaatgcgttcagttagac
ggtgcagctcgtctagttttgggcattgcactcaccgaaagctcgaggaaaacagctact
gaggccgagcgggtagctaggcaatctgaggggatgcaggcgttggcctgtggggatatg
acagacccgagagtcgtgcaccgtctcgcgttagagaatgcagagcagaggaagctggat
tcagcgttggtgtacgctaaacaggcgttgaagcttggagcagagtcggatcttgaagtg
tggttgctcctggctcgtgttttatctgcgcagaagaggttttcagacgctgagaccatc
gtggatgcagcgcttaacgagacggggaaatgggaacaggggaagctgttgcgtttgaag
gcaaagcttcgtttagctaaaggggaagtgaaggacacgattaagagttacacagagctt
ctcgctctccttcaggttcagagcaaaagcttcagttcttcaaagaagcagctgccaaag
ggatacgtagaggggttgaggagtctggagcttgggacgtggcatgatctggctcatatc
tatatagacctatcgcaatggcgtgacgcagagacatgtctctcgagatcaagactcatc
gctccttactctcctgttcgataccacaccgaaggtgtactgtgcaagagacagggacag
ctagaagaagcgatggaggcattcacaactgctctagacatggatccaatgcacgtcccg
agcctaatatcaaaggctgaggttcttttggagcttgggaaccgatcaagcatagcggtt
gtgagaagctttttaatggaggctcttaggattgataggctgaaccagtcggcttggtac
aatcttgggaagatgttcaaagctgaaggatctgtctcgtcgaagcaagaagctgttgag
tgttttcaggccgctgttgcgttggaggaaacaatgcctgttgagccattcagatga
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