Raphanus sativus (radish): 108841420
Help
Entry
108841420 CDS
T06014
Name
(RefSeq) protein RMD5 homolog
KO
K23333
E3 ubiquitin-protein transferase RMND5 [EC:
2.3.2.27
]
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rsz04121
]
108841420
Enzymes [BR:
rsz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108841420
Ubiquitin system [BR:
rsz04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
CTLH complex
108841420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CTLH
zf-RING_UBOX
zf-C3HC4_4
zf-RING_5
zf-RING_2
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
Prok-RING_4
zf-Nse
Motif
Other DBs
NCBI-GeneID:
108841420
NCBI-ProteinID:
XP_056859750
UniProt:
A0A9W3D7A9
LinkDB
All DBs
Position
2:complement(38754903..38755912)
Genome browser
AA seq
381 aa
AA seq
DB search
MELKSIKDEFDRVANKHKLSYTKTHEIVQLLSQEIHKALSLIQDTQFDHRSILLDVKKLF
MERSPGTQLESAEKELNVALTKYPKVLEKQLNSEISKAYRNNVEFDTHVVNQIIANFFYR
QGMFEIGDCFVAETGESECTTRQSFVEMFMILEAMKGRDLEPALNWAAANSEKLKQARSD
LEMKLHSLQFLKISQGQNSQEALSYARRHLAVYADSCLSEIQKLVCSLLWDKNLEQSPYS
EFLSPVMWDNAVRELTRQYCNLLGESSESPLSVTVTAGTQALPVLLKYMNVIANKKLDWQ
TMEQLPVAVELPGEFQFHSVFVCPVSKEQSSEDNPPMMMSCGHVLCKQTITRMSKNGAKT
SFKCPYCPTDVDSTRCKQLHF
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atggagttaaagagcatcaaggacgagtttgatcgtgttgcgaacaagcacaaactctca
tacaccaaaacgcacgagatcgttcagttgctttctcaagaaatccacaaggcgttgagc
ttaatccaggacactcagtttgatcacaggtccattctcctcgacgtcaagaaactcttc
atggagaggtctccagggacacaactcgaatccgctgagaaagaactcaacgtggctctc
accaagtaccccaaagttctcgagaagcagctcaactccgagatatcgaaggcttacaga
aacaacgtcgagttcgatactcatgtggtgaaccagatcatcgctaacttcttctaccgt
caggggatgtttgagatcggcgactgtttcgtcgccgagactggtgaatctgagtgtact
acaaggcagtctttcgtggagatgtttatgatactagaggctatgaaggggagagatctt
gaaccggctcttaactgggcggcggctaactctgagaagctgaagcaagcgaggtctgat
ctcgagatgaagcttcacagcttacagtttttgaaaatatctcaaggccaaaactcacaa
gaggctctcagctacgcgaggagacatctcgcagtgtacgcggatagctgcctatccgag
attcagaagctcgtttgttctctcttatgggacaagaacctcgagcagtcaccgtactcg
gagtttctctctcccgttatgtgggacaacgcggtgagagagctgacgcggcagtactgc
aacctactcggtgaatcgtctgagagtccgctgagtgtgacggtaacggccggtacgcag
gctttacctgtactgttgaaatacatgaacgtgatagcgaacaagaagctcgattggcag
actatggagcagcttcccgtggccgtggaactgcccggggagtttcagtttcattcggtg
tttgtatgtcccgtctccaaggaacagtcgagtgaagataatcctccgatgatgatgtct
tgtggccacgtgctttgcaagcagactatcaccagaatgtccaagaatggcgctaagact
tctttcaagtgtccttattgcccgaccgatgtagactccacaaggtgcaagcagttacac
ttctga
DBGET
integrated database retrieval system
