Raphanus sativus (radish): 108841499
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Entry
108841499 CDS
T06014
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 5
KO
K05391
cyclic nucleotide gated channel, plant
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
108841499
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rsz04040
]
108841499
Ion channels [BR:
rsz04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
108841499
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Paralog
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Motif
Pfam:
Ion_trans
cNMP_binding
IQ
Motif
Other DBs
NCBI-GeneID:
108841499
NCBI-ProteinID:
XP_018469760
UniProt:
A0A6J0MB45
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Position
2:complement(21836375..21839868)
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AA seq
720 aa
AA seq
DB search
MAGKPETFVRVDDLDFKLPSSSSVSRQHNYTSSISGPLHPIHGSHNTSGSFKKRFQKGSK
GLKSIGRSLGFGVYRAVFPEDLKVSEKKIFDPQDKTLLFCNKLLVVSCILSVFVDPFFFY
LPVIDGESKCLGIDRKLAITATTFRTFIDVFYLAHMALQFRTAYIAPSSRVFGRGELVID
PAQIAKRYLQRWFIIDFLSVLPVPQIVVWRFLQRSRGSDVLATKQALLFIVLVQYIPRFL
RVLPLTSELKRTAGVFAETAWAGAAYYLMLYMLASHIVGAFWYLLALERNDACWQEACSD
AGKNCTTGFLYCGNQNMDGYDVWNKTKESVLQSKCRADLDDPNPSFDFGIYTQALSSGIV
SSQKFITKYCYCLWWGLQNLSTLGQGLQTSTYPLEIMFSITLAISGLILFALLIGNMQTY
LQSLTIRLEEMRVKRRDSEQWMHHRMLPQDLRQRVRRYDQYKWLETRGVDEEYLVENLPK
DLRRDIKRHLCLALVRRVPLFESMDDKLLDAICMRLKPSLFTESTYLVREGDPVDEMLFI
IRGRLESVTTDGGRSGFFNYSLLKEGEFCGEELLTWALDPKSGANLPSSTRTVKALTEVE
AFALASEELKFVASQFRRLHSRQVQHTFRFYSHQWRTWAACFIQAAWRRYCKRKKMEEAE
AEAVPMSTTGTSSSMGAAFLVTKFAASALRTIHRNRNTRIRELVKLQKPPEPDFTAEDAD
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggcaggcaaaccagaaacttttgtgagggtggatgatctagactttaagctaccatca
tcatcatctgtatcccgtcagcataactacacctccagtatcagtggaccactccaccct
attcacggaagccacaacacatctggatccttcaagaaacgtttccaaaaaggttccaaa
ggtctcaaatccataggtcgttcccttggtttcggtgtttacagagctgtcttcccagaa
gaccttaaagtatccgaaaagaagatctttgatcctcaggacaaaactctcttgttctgc
aataaactgttggttgtgtcgtgtattctctctgtgtttgtggacccttttttcttctat
cttcctgtgatcgatggtgagtccaagtgtctcggtattgaccggaaactggctatcacg
gcaacaacgtttcggactttcatcgatgtgttttatcttgctcacatggctctccagttt
aggactgcttatattgcaccttcctccagggtctttgggcgaggtgagcttgtgatagat
cctgcacagatagcaaagagatatttgcaacgttggtttatcattgatttcctctctgta
ctccctgtccctcagattgtagtgtggaggttcttgcaaaggtcaaggggatcagatgta
ttggctacaaagcaggctttgcttttcattgttttggttcagtatatacctcggtttctt
cgtgtcttacccttgacatcagaactgaaaagaacagcaggtgtctttgcggagactgct
tgggctggtgctgcatattatctgatgttatatatgcttgcaagtcatatagttggagcg
ttctggtaccttttagccttagaacgtaacgacgcctgttggcaggaggcctgcagtgat
gcagggaaaaattgcacaacaggtttcttgtactgtggcaatcaaaacatggacggctat
gacgtttggaacaagaccaaagaatctgttcttcagtccaagtgccgcgctgacctcgat
gatcctaatccttcctttgactttgggatttatacacaggctttatcctctggcattgtc
tcttctcaaaagttcatcacaaagtattgttactgtttgtggtggggtcttcagaacttg
agtacacttggacaagggcttcaaaccagtacatacccattagagattatgttttccatc
actctggccatctccgggttgattctctttgctcttctcatcggaaacatgcagacatat
ctccaatctcttactatccgtctggaagaaatgagagtgaagaggcgtgattcagaacaa
tggatgcatcacaggatgttaccacaagatctaaggcagcgtgtgagacgctatgaccag
tacaaatggctggagacacgtggtgtagatgaagagtatctcgttgagaatctccccaag
gatctcaggagagacatcaagcgccatctctgtttggctttagtgcgcagggttccattg
tttgagagcatggacgacaagctgctagatgcgatctgcatgcggctaaaaccaagcttg
ttcacagagagtacctacttggtccgagaaggagaccctgtagacgagatgctattcatc
atacgtggccgcctagagagtgtgacaacggatggaggcaggagcggtttcttcaactac
agtctcctcaaagaaggagagttctgcggtgaagagcttctgacatgggcactggatcca
aaatcaggtgcgaatctcccgtcttccacgagaaccgtgaaggctctgacagaagtagag
gcgtttgcgctggcctcagaggagctgaagtttgtagccagccagttcaggcgtctacat
agcaggcaagtgcagcacacgttcaggttttactctcaccaatggaggacttgggctgct
tgctttatccaggctgcctggcgccggtactgcaagaggaagaagatggaagaggcagag
gcagaggccgtgcccatgtcaaccactggaacttcgtcctccatgggggctgcatttctt
gtcaccaagtttgcggctagtgcgctgcgtaccattcacaggaaccggaacacaaggatt
agggaattggtaaagctgcagaagcctcctgagcctgatttcactgcagaagatgctgat
tga
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