Raphanus sativus (radish): 108841779
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Entry
108841779 CDS
T06014
Name
(RefSeq) probable E3 ubiquitin-protein ligase ARI1
KO
K11968
ariadne-1 [EC:
2.3.2.31
]
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rsz04121
]
108841779
Enzymes [BR:
rsz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
108841779
Ubiquitin system [BR:
rsz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
108841779
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ariadne
IBR
UBA_ARI1
IBR_2
IBR_1
zf-C3HC4_2
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
108841779
NCBI-ProteinID:
XP_018470044
UniProt:
A0A6J0MD91
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Position
2:39452390..39455539
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AA seq
592 aa
AA seq
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MDDYYTAADEEDCYYSSDHESLGGIDNDDSDFHSASSKKSSTQVITQESLLAAQREDLMR
VMELLSIKEHHARTLLIHYQWDIEKLTSVFVEKGKDSLFSAAGITTLFDSGSFPSSSNMS
CDVCLEDVLADQMKRMDCGHCFCNTCWTEHFTVQINEGQSKRIRCMAHKCNAICDEDVVR
KLVSEKRPDLAEKFDRFLVESYIEDNKMVKWCPSTPHCGNAIRAEDDKLCEVECSCGLQF
CFSCTCQAHSPCSCLMWELWRKKCRDESETVNWITVHTKLCPKCSKPVEKNGGCNLVKCI
CGQYFCWLCGGATGREHTYRSIAGHSCGRYEDDKERQMERAKRDLDRYTHYHHRYKAHTD
SSKLEDKLRGKILKKVSKSEKKELKLKDFTWVTNGLNRLFRSRRILSYSYAFAYYMFGEE
LFKDEMSSEEREMKKNLFEDQQQQLEGNVEKLSQLLEEPFDDFSDEKVMDVRIHVINLSV
AVDSLCKKMYECIENDLLGSLQSGIHNIAPYSSKGIEQAAEFHASWSSSKPPLESSGTSG
ETSRPERASGSRDSEEMVYPSPHKRPRREGSFRNSKVTLLDLNLPADFIDQN
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atggatgattactacacagcagctgatgaagaggattgctattactcctccgatcatgag
tctctgggcgggattgataacgacgattccgattttcactccgcctcctctaagaaatca
tccactcaggttatcacacaggaatcgcttctggcagcacagagagaagatttgatgagg
gttatggaactgttatcgattaaggagcatcatgctcgtactcttctcattcattaccag
tgggatatcgagaagctgacttctgtgtttgttgagaaaggaaaggacagcttgttctct
gcagctggtataacaactctcttcgactctggatcctttccttcttcttcgaatatgagc
tgtgatgtctgcctagaggatgtgttagctgatcagatgaagaggatggactgtggccat
tgcttttgcaacacttgttggacggagcatttcaccgtgcagatcaacgaaggccagagc
aaaaggattagatgcatggctcataaatgcaacgctatctgcgatgaagatgttgtcagg
aagctagtcagtgaaaagcgtcctgatctagccgagaagttcgatcgtttcctcgtggag
tcgtacatcgaagacaacaagatggtcaagtggtgtccgagcactccccactgtgggaat
gcgatacgagctgaggacgacaagctctgcgaagtcgaatgctcgtgcggtcttcagttc
tgtttcagttgtacgtgtcaagcccactccccttgctcctgtctgatgtgggagctgtgg
agaaagaagtgtcgagatgagtcggagacggttaactggataactgttcatacgaagctg
tgtcccaaatgttccaaacctgtggagaagaatggtggatgcaatctcgttaagtgtatt
tgtgggcagtacttttgttggctatgtggtggagctactggaagagagcacacttatagg
agcatcgctggtcacagctgtggtcggtacgaagatgacaaggaaaggcagatggaaaga
gccaaaagggatttagacaggtacacacactaccatcaccgctacaaagcacataccgat
tcatcgaagctggaagataaactcaggggtaagatcctcaagaaagtgtcgaagtcagag
aagaaggagctgaagctcaaagacttcacctgggtcaccaacggactcaacaggctattc
agatcgaggcggatcctttcgtattcgtacgctttcgcgtattacatgtttggcgaggag
ctgttcaaagacgagatgagctccgaggagagggagatgaagaagaatctgttcgaggat
cagcagcagcagctcgagggtaacgttgagaagctctctcagctgttggaggagcccttt
gacgactttagcgatgagaaagtcatggatgtgaggatccacgtcatcaacttgtctgtt
gcggtggatagcctctgcaagaagatgtacgagtgcatcgagaatgacttgctcggttcg
ctccagtctggtatccacaacatcgcgccttacagctcaaaggggatcgagcaagcagct
gagtttcatgcttcctggagtagttccaaacctcctttggagagtagtggtacaagcgga
gagacatcgaggcctgagagagcttcaggatcaagggactctgaagaaatggtttaccct
tctccacataaacgtcccagaagagagggtagtttcaggaacagcaaagtcactttgttg
gacttgaacttgcctgctgatttcatcgaccagaactga
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