Raphanus sativus (radish): 108841810
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Entry
108841810 CDS
T06014
Name
(RefSeq) uncharacterized protein LOC108841810
KO
K13114
pinin
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03013
Nucleocytoplasmic transport
rsz03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108841810
03015 mRNA surveillance pathway
108841810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsz03019
]
108841810
03041 Spliceosome [BR:
rsz03041
]
108841810
Messenger RNA biogenesis [BR:
rsz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
108841810
Spliceosome [BR:
rsz03041
]
Complex C
Other components
EJC/TREX
108841810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pinin_SDK_memA
Motif
Other DBs
NCBI-GeneID:
108841810
NCBI-ProteinID:
XP_018470112
UniProt:
A0A6J0MCG2
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Position
1:complement(6885591..6888395)
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AA seq
419 aa
AA seq
DB search
MGDTALEKTAQELRHEIDELRRQQREITERLRDPRGIRRGGGHPGAGPRNQARRGFLRPA
ERNDVEDEPPAKRRLSSAVVKETQVEGEDVSKVADGNETNVSAGENGNSDRSDKKLERQH
RGGWSQRDAGHRGNKKGFEDMALPEPAPRNLPKNEDPKLVNRNRRMLGNLLGTLERFRKE
DKQLSGTDAYARRSAALQKAEQKAREESERLRLQERETLSEKRRRDLTLRARVAAKAEQK
ELELLFLRWCEQKKKLGNFIRTKAEPQIYYAPTRPLEEDTTEAEQRKEQTFLEWKAARRQ
EVSEYQKEIEERYLGNVEKELEKWENARKARKASNGDMNLQETMDKELETHIMEHGPKKR
KIPGGGGDEEEEEDEVEDINGGEDEMTMDDVLEEGDGNDNKEVATDTAEAEAVEGEIEQ
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgggagacaccgccttggagaagaccgcccaagagctacggcacgagatcgatgagctt
cgccgtcagcagcgcgagattacggagaggcttcgcgatcctcgtggaatccgacgagga
ggaggacacccaggcgctggtcctcgcaaccaagcccgtagaggctttcttcgacctgcg
gagaggaatgacgtagaggatgagcctcctgctaaaaggagattgtcttccgccgttgtt
aaggagactcaggtcgaaggtgaagatgttagtaaggttgctgatggcaacgaaacgaat
gtttcagctggtgaaaatgggaactctgatcgaagtgataagaagctagagcgtcagcac
cgtggaggttggtctcagagggatgcaggacatagagggaacaagaagggttttgaagat
atggcattgcctgagcctgcaccaaggaatttacctaagaatgaggatcctaaactggtt
aataggaacagaagaatgcttgggaatcttctagggactttggagaggttcagaaaagaa
gataaacagctttctggaacagatgcctatgctcgacggtccgctgcgttacaaaaggct
gagcaaaaggctcgtgaagaaagtgagcgactgagactgcaagagcgtgagactctgagt
gaaaagaggagaagagatcttacacttcgagcccgtgttgctgctaaagcagaacaaaag
gagttggaactgctattccttcggtggtgtgagcagaagaaaaaacttggcaatttcata
aggactaaagcagagccacagatatactatgcaccaacgaggcctttggaagaagataca
actgaggcagagcaacgcaaagagcagacattcttagaatggaaagcggcaaggagacaa
gaggtgagcgagtatcaaaaggagatagaagagcgatatctgggtaacgtggagaaagag
ctggaaaagtgggaaaacgcaaggaaggcgaggaaagcaagcaacggggatatgaatttg
caggaaacaatggacaaggagttagagacgcatataatggagcacggaccaaagaagagg
aagatacctggaggaggaggagatgaagaggaggaagaagatgaagtagaggatatcaac
ggtggcgaggatgaaatgacaatggatgatgtactggaagagggagatggaaacgacaac
aaagaagtggcaactgatactgcggaagcagaagcagtggaaggagaaattgaacaataa
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