Raphanus sativus (radish): 108841831
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Entry
108841831 CDS
T06014
Name
(RefSeq) serine/threonine-protein kinase VPS15
KO
K08333
phosphoinositide-3-kinase, regulatory subunit 4 [EC:
2.7.11.1
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
108841831
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
rsz01001
]
108841831
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rsz04131
]
108841831
Enzymes [BR:
rsz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
108841831
Protein kinases [BR:
rsz01001
]
Serine/threonine kinases: Other
VPS15 family
108841831
Membrane trafficking [BR:
rsz04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
108841831
Autophagy
Autophagosome formation proteins
PI3K complex
108841831
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS15-like_hel
Pkinase
WD40
WD40_Prp19
WDR55
WD40_WDHD1_1st
HEAT
WD40_CDC20-Fz
PK_Tyr_Ser-Thr
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_EML_2
Adaptin_N
Beta-prop_CAF1B_HIR1
Vac14_Fab1_bd
APH
Tti2
HEAT_EZ
Motif
Other DBs
NCBI-GeneID:
108841831
NCBI-ProteinID:
XP_018470102
UniProt:
A0A6J0MCF3
LinkDB
All DBs
Position
2:35101866..35108308
Genome browser
AA seq
1486 aa
AA seq
DB search
MGNKIARTTQVSATEYYLHDLPSSYNLVLKEVLGRGRFFKSILCKHDEGLVLVKVYFKRG
DSIDLREYERRLVKIKDVFLSLEHPHVWPFQFWQETDKAAYLVRQYFFSNLHDRLSTRPF
LSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLADFASFKPTYIPYDD
PSDFSFFYDTRGQRLCYLAPERFYEHGGETKVAQDAPLKPSMDIFAVGCVIAELFLEGQP
LFELAQLLAYRRGQHDPSQHLEKIPDPGIRKMILHMIQLEPEARLSAENYLQNYVGVIFP
NYFSPFLHTLYCCWNPLPSDMRVATCQGIFEEILKKMMENKPGDEIGVDSPLPSNAVNAS
KVQETFANQKLNTSKDLIRDTVNSKDETLYSISDALKKNRHPFLKKITMDDLGTLMSLYD
SRSDTYGTPFLPVEVNMRCEGMVLIASMLCSCIRNIKLPHLRREAILLLRSCSLYIDDED
RLQRVLPYVVSLLSDTTAIVRCAAMETLCDILPLVRDFPPSDAKIFPEYIFPMLSMLPDD
PEESVRICYASNIAKLALTAYGFLIHSFQLSNVGVLNESTSPQISSTPASELQKANGDAQ
LAQLRKTIAEVVQELVMGPKQTPNVRRALLQDIGELCFFFGQRQSNDFLLPILPAFLNDR
DEQLRSVFFEKIVYVCFFVGQRSVEEYLLPYIDQALSDQTEAVIVNALDCLSILCKSSFL
RKRALLQMIECVYPLLCYPSQWVRKAVVTFIAACSEFLGAVDSFAFIAPVIRPFLSRLPA
SIASEEGLFSCLKPPVTREVVYHILETARKPEIAEKQRKIWYSTSPQSKDWKNNDFFSKD
TGNMNLLEQKKSVEGKKPIMNASQQQEVQGKYAEKDAKLRIPRNPRPNASNTVEHRDHLN
PEKLQFSGLMAPYMSGLNNLTEPEGIPLYSFNMDKRVAMNPPVASESSLQMNSLGMSSLS
VPWMDSMSKSFNLASSVPVPKLVSGSFHVGTNPKQFYRVVHEPESRENEQMSSVISKFQD
LGVSSSSKSASVTSEDASSISDLVGEPSPSRTSVPDSGWKPRGVLVAHLQEHRSAVNDIA
PSSDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRGMCTTMLRNSTQVVVGA
SDGVLHMFSIDHISRGLGNVVEKYSGIVDIKKKDVKEGALVSLLNYTSESLSGPMVMYST
QNCGIHLWDTRSDIDAWTLKANPEEGYVSSLVTSPCGNWFVSGSSRGVLTLWDLRFRVPV
NSWQYPVICPIEKMCLCFLPPSVSLSTTMRPFIYVAAGFNEVSLWNADGGSCQQVWRVAN
YENETNVSDFQWKLPGSKANPKTNTRHNMSSKYRIEELNEPPPRLPGIRSLLPLPGGDLL
TGGTDLKIRRWDYSSPERSYCICGPSLKGVANDDFYELKTNSGVQFVQETMRRPLATKLT
AKAVLAAAATDTAGCHRDSVQSLASVKLNQRLLISSSRDGAIKVWK
NT seq
4461 nt
NT seq
+upstream
nt +downstream
nt
atggggaacaaaatcgctagaacgacgcaagtgtcggcgacggagtactacctccacgac
ttgccttcctcttacaacctcgtcctcaaggaggttctgggccgagggagattcttcaag
tcgatcctctgcaagcacgacgaaggtttggtgctcgtcaaggtctatttcaagcgcggc
gactcgatcgatctcagggagtacgagcggcgtctcgtcaagataaaggatgtgtttttg
tctctcgagcatcctcacgtctggcctttccagttttggcaagagactgataaagcggct
tatctagtgaggcagtactttttcagtaatcttcatgatcggttaagtactcggcctttc
ctcagtcttgtggagaagaaatggttggcgtttcagttgcttcttgctgtgaagcagtgc
catgagaagggtatatgtcatggtgatatcaagtgcgagaacgttttggtcacttcctgg
aactggctttaccttgctgattttgcgtccttcaaacctacctacattccttatgatgat
ccttcagacttttccttcttttatgacacaaggggacagagactttgttatctggctcca
gagagattctatgagcatggaggtgagacaaaagttgcacaagatgctccactaaagcca
tccatggatatatttgctgttgggtgtgtgatagcagagcttttccttgagggtcagcca
ctatttgaactggctcagcttctcgcttatcgcagaggacaacatgatcctagccaacac
cttgaaaagattcctgatccgggaattcgcaagatgattcttcatatgattcaattagaa
cccgaagcacgcctatcagctgaaaactacctacaaaattatgttggagttatttttcca
aactacttctcaccatttctgcacactttgtactgttgttggaatccacttccttcagat
atgagggtagcaacttgccagggcatatttgaagaaatacttaagaagatgatggaaaat
aagccaggtgatgagatcggtgttgattctcctttaccttcaaatgcagtgaacgcaagc
aaggtacaagaaactttcgcaaatcagaaactgaacacgtcgaaggacttgataagggat
actgtaaactccaaggacgagacactttactctatttctgatgccctcaagaaaaatcga
catcctttcttgaaaaagataacaatggacgatttgggtacactgatgtctctctatgat
agccgttctgacacttatggaacgccttttctaccggtagaggttaacatgagatgtgag
ggaatggttctgatcgcatctatgctttgttcttgcatccgcaatatcaagttgcctcat
ttgaggagggaagccatacttttgttgaggtcctgctctctgtatattgatgatgaagat
cgcttacaacgtgtacttccgtatgttgtttccctgctttctgatacaacagcaattgtg
cggtgtgctgccatggaaactctatgtgacattctgccgcttgtccgagatttccctccc
agtgatgcgaagatattcccggagtatatatttccgatgctctccatgcttcctgatgat
ccagaagagagtgtgaggatatgttatgccagcaatattgcaaaacttgctcttactgct
tatggattcttgatacattctttccagttgagcaacgttggggttcttaatgaatcaact
tcgccgcagatctccagtacacctgctagtgagttgcaaaaggcaaatggcgacgcacag
cttgctcagcttaggaaaactattgctgaagttgttcaggagcttgttatgggtccaaaa
cagactccgaatgttagaagagcacttcttcaggacataggggagctctgctttttcttt
ggtcagaggcagagtaatgactttttactgcccatcctccctgcctttcttaacgacaga
gatgaacagctaagatctgtattctttgagaaaattgtctatgtatgcttctttgtcggt
cagagaagtgtggaggaatatctcttgccttatattgatcaagctttaagcgatcagaca
gaggctgtcattgtcaatgcgttggattgcttatccatactatgcaagagtagcttcttg
cggaagagagctctcctccaaatgatagagtgtgtttatcctttgctgtgctatccatct
caatgggtaaggaaagcagtcgtcactttcatcgctgcctgcagtgaattcttgggtgct
gtcgactcttttgcttttattgccccagtaatacgcccctttctcagtagacttcctgca
tcaattgcttcggaggaaggtttgttttcatgcctaaagcccccagtcacaagggaagta
gtttaccatatcttggaaactgccaggaaaccagaaatcgccgaaaaacagcggaagata
tggtacagtacttcacctcagtccaaagactggaaaaataatgatttttttagcaaggat
actgggaacatgaacttgttagaacagaagaaaagtgtggaagggaaaaaaccgattatg
aatgcatcgcagcaacaagaagttcaaggaaagtacgcagaaaaagatgctaaactgaga
atccctagaaacccaagaccgaatgcttctaacacagttgagcatcgtgatcacttgaat
ccggagaagttacagttctctgggttgatggcaccatatatgtctggtttgaataactta
actgaaccagagggaatacctctctattcgtttaacatggacaaacgagtagctatgaat
cctcctgtggcttctgagtcttcactgcagatgaactctctgggcatgagttcgttgtca
gtaccatggatggattccatgagcaagtcatttaacttggctagttcggttccagtgcct
aaactagtttctggatcattccatgttggtaccaaccctaaacaattttacagagtggta
catgagccagaaagcagagaaaatgagcaaatgtcctcagtcatcagcaaatttcaagac
ctgggtgtatccagctcctcgaaaagtgcttctgtaacatcagaagatgcatcttcaata
tccgatctcgtaggagaaccatctccgtcaaggacatcggttccggattcaggttggaag
cctcgtggggtattagttgctcatctgcaggagcaccgctctgcggtcaacgacattgcc
ccttcaagcgatcatagcttctttgtcagtgcatcagatgattccacggtgaaggtgtgg
gactcaagaaagctggaaaaggacatctcgtttaggtcaaggctaacatatcatctcgag
ggaagcagagggatgtgcacaacaatgcttaggaactcaactcaagttgtagttggagcc
tccgatggtgtgttgcatatgttttccattgaccatatctcaagaggcttggggaacgta
gtggagaagtattcaggcattgttgatatcaaaaagaaggatgttaaagaaggcgccttg
gtttctcttttaaattacacctctgaaagcttatctggccctatggtaatgtatagtacc
cagaactgtgggattcatctttgggatacaagatcagatatagatgcatggacactgaaa
gcaaaccctgaagaaggatacgtgtcttctttggttacaagcccatgcgggaattggttt
gtgtctgggtcttcaaggggagtactaactctttgggatctgaggtttcgtgttcctgta
aattcatggcaataccctgtaatatgccccatagagaagatgtgcctctgctttcttcct
ccaagcgtctcgctgtccactacgatgagaccttttatttatgttgctgctggtttcaat
gaagtttcactctggaatgcagatggaggtagctgtcaacaggtgtggagagtagccaac
tatgaaaatgagacgaatgtttccgactttcaatggaagctaccaggcagtaaggcaaat
cccaagacgaatactcgccataacatgagctcaaagtatagaattgaagagttgaacgag
cctcctcctcgtcttcctggtatccgctcgttgcttcctttgcccggaggcgacttgtta
acaggtggtactgacttgaagattcggcgttgggattactccagccctgagagaagttac
tgtatctgtggtccgagtttgaagggagttgcaaacgatgatttctacgaactcaaaacc
aactctggagtgcagtttgttcaggagacaatgaggcggcctctggcgaccaaactgacg
gcaaaggcagtacttgcagcggctgcaacagacacagcaggatgtcaccgtgactcagtt
cagtctcttgcatcagtgaagctgaaccagagactgttaatatcaagcagcagagatgga
gcgataaaggtctggaagtaa
DBGET
integrated database retrieval system
