Raphanus sativus (radish): 108841848
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Entry
108841848 CDS
T06014
Name
(RefSeq) LOW QUALITY PROTEIN: glutamate receptor 2.5-like
KO
K05387
glutamate receptor, ionotropic, plant
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rsz04040
]
108841848
Ion channels [BR:
rsz04040
]
Ligand-gated channels
Glutamate (ionotropic)
108841848
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Gene cluster
GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Peripla_BP_6
Lig_chan-Glu_bd
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
108841848
NCBI-ProteinID:
XP_018470125
UniProt:
A0A6J0MC72
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Position
2:complement(26998315..27002268)
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AA seq
917 aa
AA seq
DB search
MSFSHNLVSRSLFPLRLLIFLIFLILYGKSQKEALQVKVGVVLNTNVTLVDLSLRAINMS
LSEFYKTNKDFKTRIVLHIRDSKQTVVGAAASALYLIKKRGVVAILGPGNSMQAPFIINL
GNQSQVPIISFSATSPVLDTLRSPYFIRAAHDDSAQVHSIIAILKSFRWREAVPIYVDNE
FGEGILPYLVDAFQENNVRIRYRSAISLHSSNDQIENELLKLMTMPTRVFIVHMLPDLGS
RLFSIAKKIGMMENGYVWIVTNGIADLMSLMDESSVEAMHGVLGVKTYFSRSNELTYLKT
RWRKRFGGEELNHFECWAYDAATALAMSVEKISDVDMSFNKTKKTMSIDDNETDLDDLAT
SLSGPKLLEALSTVSFKGVAGRFQLKQGKLEATTFKIINIEESGERTVGFWKSNEGLVKS
LSTSQSSSGLRPIIWPGDSIGVPKGWEQPISPKKLRIAVPKKDGFNQFVKVTKDANTNXP
TISGFCIDVFNMVISQMPYSVPFEYVPFETPEGKSDGNYDEMVYRVFLGEYDGAVGDTTI
LANRSAYVDFALPYSETGIVFVVPVKDEREKGEWVFLKPLTKELWLLTAASFLYIGMMVW
IFEYHADDDFKTHKMSDKISNVFYFSSSTLFFAHRKPSESFFTRALVVVWCFVLLILTQS
YTATLTSMLTVQELRPTVRHMDDLKKSGVNVGYQSGSFTFERLKLMGYEESRLKAYDSPE
EMRELFLNKSSDGGIDAAFDEVPYVKLFMAKYCSEYSIIEPTFKADGFGFAFPLGSPLVT
DISRQILNITEGETMKAMENKWFFGDRHCLDSTTADTPIQLDHHSFRALFLMVFVVSVIL
LLLMYGSKRYKERRVEEIELVAQNEVNIEGNVVDGEEADDNEHHVVDVDTALLRRKNLTS
TSIPTRRAPPLLRLKSA
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atgtctttctcccataatctcgtgtctcgttctctttttcctttacgtcttttaattttc
ctcatcttcttaattttatacgggaaatcgcaaaaggaagctttacaagttaaagtggga
gttgttcttaacactaatgtaacattagtagatttgagcttgcgagctatcaacatgtct
ctgtcggaattctataagactaataaagacttcaagacaaggattgttctccacatccga
gactccaaacaaactgttgttggtgctgctgcttcagctttatacttgatcaagaagagg
ggagtggtagctattcttggaccagggaactcaatgcaagctccatttataatcaacctc
ggaaaccaatctcaagttcccataatttcattctcagcaacaagtcctgttcttgatacc
ctacgtagtccatatttcatcagagcggcacacgacgactcagctcaagttcactccatc
attgccatcttaaagtcatttagatggagagaagctgtgcctatttatgtagacaatgag
ttcggagaaggtattcttccttacttagtcgatgcttttcaagagaataacgttcgtatt
agataccgaagcgccatatcgttgcattcttctaatgatcaaatcgagaacgagctttta
aaactaatgaccatgcccactagggtttttatcgtgcacatgttgcctgatctagggtca
aggcttttttccatagcgaaaaagattggtatgatggagaacggatatgtatggattgtt
acaaatggtatagctgatctcatgagtttaatggatgaatcaagcgtggaagccatgcat
ggtgtcttgggcgtcaaaacgtatttctcaagatcaaatgagctaacgtatctcaaaact
cgttggcgaaaaagatttggaggagaagagctaaaccattttgagtgttgggcttatgat
gctgccacagcacttgctatgtcggttgagaaaatcagtgacgtcgacatgagtttcaat
aagaccaaaaaaacaatgtcaatagatgataatgagactgatcttgatgatcttgctact
tctctttctggtcctaagcttcttgaagcgttgtcaacagtcagtttcaaaggtgttgct
gggagatttcagctaaaacaagggaagctagaggcgacaaccttcaagataatcaatata
gaagaaagtggggaaagaacggttggattttggaaatcaaatgaaggattagtgaagagt
cttagtacctcacagagctcaagtggccttagaccgataatatggccaggggacagtatt
ggtgtgcctaaaggttgggaacagccaattagcccaaagaagctgaggatagcagttcca
aagaaggatggtttcaaccaatttgtgaaggtaacaaaggatgccaacactaatngtcct
acaattagtgggttttgcatagatgttttcaacatggtgataagtcaaatgccatattct
gtcccatttgagtacgttcctttcgaaactcctgaaggaaaatcagatggaaactatgac
gaaatggtttatagagtgtttcttggggagtatgatggagcagtaggtgataccacaatc
ttagctaaccggtctgcttatgttgattttgcattgccatactcagagactggtattgta
tttgtggtaccggttaaggatgagagagagaaaggagaatgggtgttcttaaagccttta
acaaaggagctatggttgctcactgctgcttcttttctatacattgggatgatggtttgg
atttttgagtaccatgcagatgacgatttcaagacacataagatgtctgataagatatct
aacgtgttctacttctcatcttctactctcttctttgcacataggaagccatcagagagt
tttttcacaagggctcttgtggtggtttggtgctttgtgttgttgattctgacacagagc
tacacagcaacactaacatcgatgctgacggttcaagagcttagaccaacagtaagacac
atggacgatctgaagaagagtggagtgaacgttgggtatcaatctggttcgtttacattc
gaaagactgaaactaatgggctacgaggaatcgaggctaaaggcttatgactctcctgaa
gaaatgcgtgagctctttctcaacaagagcagtgatggtggtattgatgctgcctttgat
gaagtcccttatgtcaagcttttcatggctaaatattgctcagagtattccattatagag
cctacctttaaggctgatggctttggctttgctttcccattgggatctccgctggtgaca
gatatttcaagacagatcttgaacataactgagggagagaccatgaaagcaatggagaac
aagtggtttttcggagacagacattgtcttgactcgaccacagcggatactccaatccag
ctcgatcaccacagctttcgagctctgtttctgatggtctttgtagtctctgtgattctg
ctgttgctcatgtatggtagtaagcgatacaaagagagacgagtcgaggagattgaactt
gtagctcaaaatgaagtcaatatagaaggtaacgttgtagatggagaggaagcagatgat
aatgaacatcatgttgtggacgtagacacagctttgctgcgtcgtaagaatctgacatca
acgtctatacccacaaggagggctccaccactgttaagattaaaatcagcatag
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