Raphanus sativus (radish): 108841868
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Entry
108841868 CDS
T06014
Name
(RefSeq) protein argonaute 9
KO
K11593
eukaryotic translation initiation factor 2C
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsz03019
]
108841868
03036 Chromosome and associated proteins [BR:
rsz03036
]
108841868
Messenger RNA biogenesis [BR:
rsz03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
108841868
Chromosome and associated proteins [BR:
rsz03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
108841868
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
108841868
microRNA pathway
RISC loading complex
108841868
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
THF_DHG_CYH
Motif
Other DBs
NCBI-GeneID:
108841868
NCBI-ProteinID:
XP_018470148
UniProt:
A0A6J0MDV1
LinkDB
All DBs
Position
2:19891624..19897371
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AA seq
907 aa
AA seq
DB search
MGSDEDKALLPPPPPVLPSNLVPELDPVKKSMILPMARRGSGSKGQRIPLLTNHFKVNFN
NANGHFFHYSVAITYEDGRPVEAKGIGRKILDKVQQTYQTDLGSKYFAYDGEKTLFTVGP
LPSNKLDFSVVLEDAPSSRNNTGNGSPSEGNDADKKRTRRPNQSKKFMVEISYAAKIPMH
AIGAALQGKETDSLQDAIRVLDVILRQSAARQGCLLVRQSFFHNDAQNFVPIGAGVIGVR
GFHSSFRTTQGGLSLNIDTSTTMVVQPGPVIEFLLANLNVKDPYSVDWKKAGRALKNLRV
KVAPSNREYKISGLSDNPCKDQLFTRNSKNEKGEIVETQTTVYEYFTEFRNVPLKYSGDF
PCINVGKPKRPTYIPIEHCELVSLQRYTKSLTNLQRASLVEKSRQKPPERMNSLTTGLKN
SNYNADLVLRESGVSIGSNFTQVEGRILPAPKLRVGNGEDFQPRNGRWNFNNKRLVEPTT
VTRWAVVNFSARCDTNRLIPDLIRCGNMKGINVEPPYEVVFQENAQFRNAPPHVRVEKMF
EQIQSKLPGKPKFLLCILAERKNSHIYGPWKKKNLSELGIVTQCIAPTPRINDQYLTNVL
LKINAKLGGLNSLLAMERSQAMPAVTQVPTIIVGMDVSHGSPGQSDIPSVAAVVSSRQWP
LISKYRACVRTQSRKVEMIDNLFKLVPNKEEKLVDEGIFRELLVDFYASSQKRKPDHIII
FRDGVSESQFNQVLNIELDQMMQACKFLDETWNPKFTVIIAQKNHHTKFFQDKGPDNVPP
GTIIDSKICHPRNNDFYLCAHAGMIGTTRPTHYHVLYDEIKFTTDDLQELVHSLSYVYQR
STTAISVVAPICYAHLAAAQMGSVMKFEDMSLSETSSSHGGITTSGAVPVPPMPKLNPDV
ASSMFFC
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atgggttccgatgaagataaagcgctactaccaccgcctccacctgtccttccttccaac
ctcgtccctgagcttgaccccgtcaagaagagcatgattcttccgatggcccggcgtggc
agtgggtccaagggacagaggattcctcttctcaccaaccacttcaaagtcaacttcaac
aacgcaaacggccacttcttccactacagcgttgctataacgtacgaagatggccgtcca
gtggaggctaagggaatcggcaggaagattctcgacaaggttcagcagacctatcagact
gacttgggctccaagtactttgcttacgatggcgagaagactctcttcactgttggtcct
cttcccagcaacaaacttgacttctctgtcgttcttgaagacgcaccctccagcagaaac
aacactggaaatggtagcccaagtgaaggcaatgacgctgacaagaaaagaacaaggagg
cccaaccaatccaagaagttcatggtggagataagctatgcggcgaagattcccatgcac
gctattggagctgctctccaaggaaaagaaaccgacagccttcaagatgccatcagagtg
cttgatgtcattctgcgccagagtgcagctaggcaaggatgtcttcttgttcgccagtcg
ttcttccacaacgacgctcagaactttgtaccaatcggtgcaggtgttattggcgtgaga
gggttccattccagtttcagaaccactcagggaggcttgtccttgaacatcgacacttca
actacgatggtagttcaacctggccctgttattgagttccttctggcaaacctgaatgtg
aaagacccatactctgttgactggaagaaggctggacgtgcgctcaagaacctcagggtt
aaggttgctccctcaaaccgagagtacaagataagtggacttagtgacaatccctgcaaa
gatcaattgtttactcggaactccaagaacgagaagggggaaattgtggagactcagaca
actgtgtatgagtacttcaccgagttccgtaatgtcccactgaagtattcaggtgacttc
ccttgcatcaacgttggtaaaccaaagcgccctacttacatccccattgagcactgtgag
cttgtgagtcttcagcgttacacaaagtcgcttaccaatcttcagagggcttcccttgtt
gaaaagtctaggcaaaaaccacctgagaggatgaattccctaacaactggtctgaagaac
agcaattacaatgctgacttggtgttgcgagaaagtggtgtcagcattggctctaacttc
acccaagtggaagggcgcatcttaccagcaccaaagctgagagttggcaatggagaggac
tttcaacctcgcaatgggcgctggaacttcaataataagagactggttgagccaaccact
gtcaccagatgggctgttgtgaacttctccgcacgctgtgatactaacaggctcattccg
gacttgattcgctgcggaaacatgaaaggaatcaacgtggagcctccttacgaagtggtc
ttccaagaaaatgctcagttcaggaatgcgccaccacatgtcagagttgagaagatgttc
gagcagatccaatccaagctcccagggaagcctaagttccttctctgcatcctcgcagaa
aggaagaactctcacatctatggtccttggaagaagaagaatctttctgaactcggaatc
gtgacccagtgcattgctcccacccccagaatcaatgatcagtacctcaccaacgttctc
ctcaagattaatgcgaagctgggtgggttaaactctctgctagccatggagcgctcacag
gcaatgcctgcagttacgcaagttcccacaatcattgtcgggatggatgtttcccatggt
tcccctggccagtctgatatcccatcagttgctgcggttgtgagctccaggcaatggcca
ctcatctccaagtatagggcatgtgtgcgcacacagtctcgtaaagtggagatgattgac
aatctcttcaagctcgtcccgaacaaagaagagaagctcgttgacgagggaattttcagg
gagctcttggtcgacttttacgccagctcccagaagaggaaaccagaccacatcatcatt
ttcagggatggtgtgagtgagtcacagtttaaccaggttctgaacatcgagttggaccag
atgatgcaggcatgcaagtttcttgatgagacatggaaccccaagtttacggtgatcatt
gcccagaagaaccaccacaccaagttcttccaggataagggccctgacaatgttcctcca
gggacaatcattgacagcaagatctgccaccctcgcaacaacgacttctacctctgcgcc
catgctggaatgattggaacaacaaggccaactcattaccatgtgctgtacgacgagatc
aagtttaccactgatgacctccaggagcttgtgcattctttatcctatgtctaccagagg
agcaccactgccatctcagttgttgcaccgatttgctatgctcatttggcggctgcacag
atgggaagtgtaatgaagtttgaggacatgtccttgtctgagacttcatcgagccatggc
gggatcactacatccggagcagtccctgtgccgcccatgccaaagctgaacccggacgtt
gcgagttccatgttcttctgctga
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