Raphanus sativus (radish): 108841929
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Entry
108841929 CDS
T06014
Name
(RefSeq) DNA-directed RNA polymerase III subunit 1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
108841929
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rsz03021
]
108841929
Enzymes [BR:
rsz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
108841929
Transcription machinery [BR:
rsz03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
108841929
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_1
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Ribosomal_L40e
Zn_ribbon_10
Motif
Other DBs
NCBI-GeneID:
108841929
NCBI-ProteinID:
XP_018470217
UniProt:
A0A6J0MCR5
LinkDB
All DBs
Position
2:complement(20948916..20957726)
Genome browser
AA seq
1377 aa
AA seq
DB search
METKTEIEFTKKPYVEDVGPLKIQSINFSVLSDIEVMKAAEVQVWKNMYYESNFKPIEGG
LLDPRMGPPNKRSTCATCHGNFQNCPGHYGYLKLDLPVYNVGFLSFILDILKCICKGCSN
MLIDEKMYEDHLKKMRNPRTEPLRKTELAKAVVKKCSAMASQRAITCKKCGYLNGMVKKP
AASQFGIGISHDRSRIHGGEIDEFKSAISHTKESAGGINPLTYVLDPNVVLRLFKGMSDK
DCELLYIAHRPENLITTCMLVPPLSIRPSVMIGGTQSNENDITERLKKIIQDNASLHKIL
SQPTTSPKNMQVWDTLQSEVAQYINSEVRGVQVMPNAKLLAGLLQRLKGKTGRFRANLSG
KRVEFTGRTVISPDPNLKITEVGIPILMARILTFPECVSHHNIDKLKQCVRNGPNKYPGA
RSVRYTDGSSRTLVGDYRKRIADELAFGCIVDRHLEDGDAVLFNRQPSLHRMSIMCHRAR
IMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAITLMGVQNNLCTPKNGEMLV
ASTQDFLTSAYLITRKDTFYDRAAFSLICSYMGDAMDSIDLPTPTIFKPIELWTGKQVFN
VLLRPNASVRVYVTLNVKEKNFKKGEDYDETMCINDGWVYFRNSELISGQLGKATLGNGS
KDGLYSILLRDYSSHAAAVCMNRLAKLSARWIGIHGFSIGIDDVQPGEKLKKGRKKIVDQ
RYDDCDKLIKNYVKGDLDAAKTLEAELTGFLNKIREETGKLCMEGLHWRNSPLIMSQCGS
KGSPINISQMVTCVGQQSVNGSRAPDGFIDRSLPHFPRNSRTPEAKGFVANSFYDGLSAT
EFFFHTMGGREGLVDTAVKTASTGYMSRRLMKALEDLLVHYDHTVRNASGCILQFTYGDD
GMDPALMEGKDGKPLNFDRLFLKIQATCPPRSHHSYLSSEELLQKFDEELVRQDTSRVCT
DAFVKSLREFVCLLGVKSASPSQIFSKGSGVTDKQLEVFVKICVSRYRGKTIEPGTAIGP
IGAQSIGEPGTQMTLKTFHFAGVASMNITQGVPRINEIINATKTISTPVISAELENPLVE
ASARMAKGRIEKTTLGQVAESIEVLMTSTSASVRITLDKKIIEEAFLSITPWSVKNAILK
TRIKLQDENIRVLDTGLDIIPKGDQYGTHFTLHNLKNVLPTVIVNGIKTVERVVIAEDTD
KKKEIDGKKPLKLFVEGTNLLAVMGTPGINGRTTTSNNIVEVSKTLGIEAARTTIIDEIG
SVMGNHGMSIDIRHMMLLADVMTYRGEVLGIQRTGIQKMDKSVLMQASFERTGDHLFSAA
ISGKVDNIEGVTECVIMGIPMKLGTGILKVLQKTMTKDLPETKDLPKLNYGPDPIIS
NT seq
4134 nt
NT seq
+upstream
nt +downstream
nt
atggagacgaagacggagatcgaattcaccaaaaagccttacgtcgaagatgttggtcct
ctcaaaatacaaagcataaacttctcagtgctttctgatattgaagtcatgaaagctgct
gaggttcaggtctggaagaacatgtactacgagtccaatttcaaacctattgaaggcggc
ttgttggatcctcgaatgggtcctccaaacaaaaggtctacatgcgcaacatgtcatggc
aacttccaaaactgtcctggacactatggctatctcaagcttgatcttccggtttataac
gttggattcttgagttttatccttgacattttgaagtgtatctgtaagggctgttccaac
atgcttattgacgagaagatgtatgaagatcacttgaagaagatgcggaatccaagaacg
gagcctttgaggaagactgagttggccaaagctgttgtcaagaagtgcagtgcgatggct
agccagagagctattacatgcaaaaaatgtggatacctcaatggcatggtaaagaagccc
gcagcatcgcagtttggtataggcataagtcatgaccgatccagaatccatggtggagag
attgatgaatttaaatctgctatatcccacacaaaagagtctgctggaggaataaatcct
cttacctatgttcttgatcctaacgtggtgcttagactttttaaaggaatgagtgacaag
gactgtgaacttctttatattgctcatagacctgagaatcttatcacaacgtgcatgctc
gtgccacctttatcaatccgaccgtctgttatgattggtggtactcaaagtaatgaaaac
gacataacagagagattaaagaaaatcattcaagacaatgcttctcttcataaaatttta
agtcagcctaccacatcgcccaaaaacatgcaagtatgggatacacttcaaagcgaggtt
gcccaatacattaacagtgaagtccgaggtgtccaggtcatgccaaacgccaagctactg
gctggactccttcagcgtctgaaaggaaaaacgggacgtttccgtgcaaacttgtcagga
aagcgtgtcgagttcactggtagaactgttatttcacctgatcccaatttgaaaattaca
gaggttggaattcctattcttatggcccggatcttaacttttcctgaatgtgtttcccat
cataatattgataagttgaagcaatgcgtccgtaatggccctaataaatatcctggtgcc
agaagtgtcagatatacagatggttcttcaaggactttggtcggtgattatcggaagcgt
attgctgatgaactggcctttggatgcatagttgaccgtcatttggaagatggggatgct
gttcttttcaacagacaaccgagtctgcatcggatgtctatcatgtgtcacagggcaaga
ataatgccttggagaacattgaggttcaacgaatcggtttgtaatccatataatgctgat
tttgatggtgatgagatgaacatgcacgtaccacaaacagaggaggctcgtacagaggct
attacattgatgggggtacaaaacaatttatgcaccccaaaaaatggagaaatgttagta
gcatcaacacaggattttttgacatctgcctatttgataacgagaaaggacacattctat
gaccgtgcagccttttcacttatatgttcttacatgggagatgccatggattccatagat
ttgcccacgcccacaatctttaagccaatagagctttggacgggtaaacaggtttttaat
gttttgctgcgcccaaatgcaagtgtcagagtctacgttactcttaatgtgaaagagaag
aacttcaagaagggagaagattatgacgaaacaatgtgcataaatgatggatgggtttat
tttcgaaacagtgagctaatatcaggacaactggggaaggctacattaggaaatggaagc
aaggatggattatattcaattcttcttcgagattacagctcccatgcagctgcagtctgc
atgaatcgtctagcaaaattgagtgctcggtggattggaatccatggcttctccattggg
atcgatgacgttcaacctggagaaaagttgaaaaagggaagaaaaaaaatagtcgatcaa
cgatatgatgattgtgataaattaattaagaattatgttaaaggagatctagatgctgca
aaaacactggaagctgagttaacagggtttcttaataaaattcgagaagagactgggaag
ctctgtatggagggattgcattggagaaacagtcccttgattatgtcacaatgtggttcc
aagggatcccctatcaatatcagtcagatggttacatgtgttggtcagcagtcagttaat
ggtagccgtgctcctgatggatttatagatcgaagtcttcctcatttccctagaaactcc
agaacacctgaagctaagggttttgttgctaattccttctacgacggccttagtgccaca
gagtttttctttcacactatgggaggacgagaaggtctagttgatacagcggtgaaaacc
gccagtacaggttacatgtcccgtagactgatgaaagccttggaggatctcttagtccat
tatgatcacacagtgcgaaacgccagcggatgcatacttcagtttacttatggggatgat
gggatggacccagcactaatggaaggaaaggatggaaagcctttaaatttcgatagatta
tttctgaaaattcaggccacttgtcctcctagatcgcatcacagttatctttcttcagaa
gaattgttgcaaaagttcgatgaggaattagtcaggcaagatacaagtcgggtttgcact
gacgccttcgtgaaatctcttcgagaatttgtttgtttgctcggtgtaaagtctgcaagc
ccgagccagattttctctaaaggatctggtgtgactgataagcaactcgaggtttttgtg
aaaatttgtgtatctcgataccgaggaaaaacaatagaacctgggactgcaattggacca
ataggagctcagagtatcggagagcctgggacgcaaatgactctgaaaacttttcacttt
gctggagttgctagcatgaatatcacccaaggagttcctcgaatcaacgaaatcataaat
gctaccaaaactataagcacgcctgtcatctctgcagaacttgagaaccccctggtagag
gctagtgcacgaatggccaaaggacgcatcgagaaaactactttaggacaggttgctgag
agtatcgaggtgcttatgacttcaacatcagcgtcagtgaggataacccttgacaagaaa
ataatcgaggaggcgtttttgtctataaccccctggtcggttaaaaatgccatactaaag
accagaatcaaactgcaggatgagaatatcagggtcttagatacgggattggatattatt
ccaaagggagatcaatatggaactcatttcactctccacaatctgaagaatgtgctgcca
actgttatagtgaatgggatcaaaacagttgagcgagttgttatagcagaggatacagat
aaaaagaaagagatagatgggaagaagccgttgaaactctttgtggagggaacaaacctc
ctggctgtaatggggactcctggaatcaatgggagaactactacaagtaacaatattgtc
gaagtgagcaaaacactgggaattgaggctgcaaggacgacaattattgatgaaataggg
tcagttatgggaaaccacggcatgagtatagacattcgtcacatgatgcttttggctgac
gtcatgacttaccggggtgaggtactcgggatacaaagaaccgggatacagaagatggac
aaaagtgtgctgatgcaggcatcctttgagaggactggagatcatttatttagtgcagca
attagcgggaaagttgataacatagagggagttacagaatgtgtgattatgggcatacca
atgaaactcggaaccggaatcctcaaagtcctccaaaagactatgactaaagatctgcct
gagactaaagatctgcctaagctgaactatggtcctgatccaatcatctcttga
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integrated database retrieval system
