Raphanus sativus (radish): 108841963
Help
Entry
108841963 CDS
T06014
Name
(RefSeq) probable rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
108841963
Enzymes [BR:
rsz01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
108841963
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
RhgB_N
Chromo_MORC2_6th
Motif
Other DBs
NCBI-GeneID:
108841963
NCBI-ProteinID:
XP_018470257
UniProt:
A0A6J0MCV5
LinkDB
All DBs
Position
1:4295531..4298872
Genome browser
AA seq
633 aa
AA seq
DB search
MSSVKLKLQDKGNHVVMDNGTARVTLSKPDGIVTGIEYNGIDNLLEVLNDESNRGYWDLV
WGGPGTAGTFDVIKGTKFEVIMETEEQIEISFTRKWDPSQEGKAVPLNIDKRFVMLSGSS
GFYTYAIYEHLKEWPAFSIAETRIAFKLRKEKFHYMAITDDRQRFMPLPDDRLPDRGQAL
AYPEAVLLVNPVEPQFKGEVDDKYQYSCENKDITVHGWICTEQPSVGFWLITPSHEYRTG
GPQKQNLTSHVGPTSLAVFMSAHYTGEDLVPKFSEGEAWKKVFGPVFVYLNSSTDDDNDP
LWLWQDAKSQMNVEVESWPYSFPASDDYVKAEQRGNVVGRLLVQDRYVDKDFMAANRGYV
GLALPGAAGSWQRECKDYQFWTRTDEEGFFYINGVRPGQYNLYAWIPGFIGDYKYEDIIT
ITPGCYMYMEDLVYQPPRNGATLWEIGFPDRSAAEFYAPDPNPKYVNKLYQNHPDRFRQY
GLWERYAELYPDKDLVYVVGSSDYRKDWFYAQVTRKKDNKTYQGTTWQIKFELKNIDKDH
TYTLRVAIASATFAELQVRVNDANASPLFTSGLIGRDNSIARHGIHGLYWLFNVEVAGSK
LVEGENTLFLTQSRSISPFQGIMYDYIRFEAPS
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtctgttaaactcaagttacaagataagggcaatcatgtggtgatggataatggc
actgcacgtgttacattatcgaagcctgatggaattgttacaggtatcgagtataatggc
attgataacttgctcgaggttcttaatgacgaatccaacagagggtattgggaccttgtt
tggggtggaccaggaaccgctggtacatttgatgtaattaaaggaacgaagtttgaggta
ataatggaaaccgaagaacagattgagatttctttcacaagaaaatgggatccatcacaa
gaaggcaaagctgtccctttgaacattgacaaaagatttgttatgcttagtgggtcgtca
ggattctacacttatgccatctacgagcacttgaaagaatggcctgctttctcaatagct
gaaactcgaattgccttcaagctcagaaaggagaagtttcattacatggcaataactgat
gataggcagagattcatgccattgcctgatgaccggttaccggatagaggccaagctctg
gcttaccctgaagctgttctacttgttaaccctgttgagcctcaatttaaaggagaggtt
gatgataagtaccaatattcatgcgaaaacaaagacattactgttcatgggtggatatgc
acggagcaaccatcagtcggtttctggctcataactcctagccatgagtaccgaaccggt
ggaccccaaaaacagaacttgacatctcacgttggacccacttctcttgctgtgtttatg
agtgcacactatacaggggaagatttagtgccaaagttcagtgaaggagaggcatggaag
aaggtgtttggaccggtctttgtctatttaaactcctctactgatgatgataatgaccct
ctttggctctggcaagatgctaaatctcagatgaatgtggaagtggaaagctggccttac
agttttccagcttctgatgattatgtgaaagctgagcaacgtggtaatgttgttggcaga
cttctcgttcaagataggtatgtagataaagatttcatggcagcaaatagaggttatgtt
ggtttggctctgcctggagctgctggttcatggcaaagagaatgcaaggattatcaattt
tggacaagaacagatgaagaaggattcttttacataaatggagtacgaccaggacaatac
aatctctatgcatggattcctggttttattggcgactataaatacgaagacattatcacc
atcactccaggttgttacatgtatatggaagatcttgtatatcagcctccaagaaatgga
gcaaccttgtgggagattggctttcctgatcgatcagccgcagagttttatgctcctgat
ccgaatccaaaatatgtcaacaaactttatcaaaatcaccctgacaggttccgacaatat
ggattatgggaaagatacgcagaactataccccgataaagacttggtatatgtagttggc
tctagcgactataggaaagactggttttatgctcaagtcactagaaaaaaggataacaaa
acatatcaaggaacaacatggcaaatcaaattcgagctcaaaaacattgataaggatcac
acatatactttacgagtagccatcgcatcagctacttttgccgaactccaagtacgtgta
aatgatgcgaacgcaagcccgttgttcacgagcgggttgattggcagagacaactcgata
gcaagacatggaatacacggattgtactggttgttcaacgtggaagtggctggttctaag
cttgtagaaggcgagaatacattgtttcttacgcagtcaaggtctataagtcctttccaa
gggattatgtatgattacatccgattcgaagctcccagctaa
DBGET
integrated database retrieval system
