Raphanus sativus (radish): 108842047
Help
Entry
108842047 CDS
T06014
Name
(RefSeq) small RNA 2'-O-methyltransferase
KO
K20798
small RNA 2'-O-methyltransferase [EC:
2.1.1.386
]
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rsz03036
]
108842047
Enzymes [BR:
rsz01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.386 small RNA 2'-O-methyltransferase
108842047
Chromosome and associated proteins [BR:
rsz03036
]
Eukaryotic type
Gene silencing
piRNA pathway
108842047
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
dsRBD2
Hen1_Lam_C
Hen1_LCD
DSRM_2
Methyltransf_12
Methyltransf_31
dsrm
Methyltransf_25
Methyltransf_11
Methyltransf_23
Methyltransf_32
MTS
Motif
Other DBs
NCBI-GeneID:
108842047
NCBI-ProteinID:
XP_018470356
UniProt:
A0A6J0MFQ9
LinkDB
All DBs
Position
2:complement(31797339..31801610)
Genome browser
AA seq
935 aa
AA seq
DB search
MAGGGKHTLTPKAIIHQKFGANAIYTVEEVHDSSQSACPGLAIPQKGPSLFRCHLQLPDF
SVVSNVCKKKKDSEQSAAELALDKLGIRPQNDDLTEDEAWDDLVGRIKYIFSDEFLSAEN
PLGAHLRAALRRNGDCCGSVPVSVVATFDAKINSRCKIINPSVESDPFLVISYVMKAASK
LPDFIVASPDKASLRRKNPYPSEIIEALAATQVSDSLDSRKFNAAYIPCKGEEIVDLDSV
DVSSGRYYLDSIAERLCLKDGNQVMISRTFGKALCGSECRLYSPIPKFKSSEVSESLSEE
STRTEKSRNARASYICGQEIHGDAVLASVGYRWKSEDLDYDDVTVKSFYRICCGMSPNGI
YKISRQALLVAQLPVSFTTKSNWRGPFPREILSMFCHQHRLADPVFTISTAPVKSLAEIY
RSHRKLKVSGGSDGGDDENLSKEKEDTPGLGNGFRCEVKVLTKSQDLVLECSPRKFYEKE
NDAVQNASLKALLWFSKYFDDLDVNGSDTDDDEEDTKSPGTHVFRFPPNFGNVEDSSGTE
KVVPSVVEKRVPTITNGSVVSICYSLSLEVDPEFSTDGEVSEEDMESEVDADYEHSVDLI
ESHEEIEFEMGTKAMDSLIESAVSQMTVGEFASYNTSLCTASEALILAVATDTARARYLL
SKRPQIVNSIILLGVKGPSEERMEAAFFKPPLSKQRVEYAVKHIKDSSASTLADFGCGSG
SLLDSLLDYPTTLQTIIGVDISPKGLARAAKMLHVKLNKEACNVNTATLYDGSILEFDSR
LFDIDIGTCLEVIEHMEEEQACEFGEKVLSLFRPKLLIVSTPNFEYNTILQRSTTPDTQE
ETNSEPQLPKFRNHDHKFEWTREQFNHWATKLAERHNYSVEFSGVGGSGEVEPGFASQIA
VFKREASAVENVAEGSMQPYKVIWEWKKGSGEKKD
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtggagggaaacacactcttactccaaaggcaattatacatcagaagtttggt
gctaatgcaatctatacagttgaggaagtccatgactcttctcagagtgcttgtccagga
ttggctatacctcagaaaggtccatctctctttagatgtcacttgcagctaccagacttt
tctgttgtttcaaatgtctgtaagaagaagaaagattcagaacaatctgctgctgagctt
gctctcgacaagctagggattcgtcctcagaatgatgatcttaccgaggatgaagcttgg
gatgacctcgttggacgcattaagtatatattctctgatgagtttctttcagctgaaaat
cctctgggagctcaccttagagctgcactgcgaaggaacggtgattgttgcggctccgtt
cctgtttccgtcgttgctacatttgatgcaaagattaacagtcgttgtaaaatcatcaac
ccttctgtggaatcggatcctttcttggtcatttcctatgtcatgaaggctgcttcaaag
ttgccggacttcattgttgcatctccggataaagcttcactccgaaggaaaaatccttac
ccttcagaaatcatagaagcactagcagctactcaagtatctgattccctagatagcaga
aaattcaacgctgcatatataccatgcaaaggcgaggagattgttgacttagattctgtc
gatgtttcatcaggccggtattacttggatagtattgctgaacggctctgcttgaaggat
ggcaaccaagtgatgatatccaggacttttggaaaagctttatgtggctctgagtgtaga
ttgtactctcctattcctaagtttaagtcctcggaagtctctgaaagcttaagtgaagaa
tcaactcgtactgaaaaatctcggaatgcacgagcaagttacatttgtggtcaagagatc
cacggggatgcagtcttggcatctgttggttaccgatggaagtccgaagatcttgactat
gatgatgtcactgtaaagtcattttacaggatatgttgcggtatgtcacccaatggcatc
tacaaaatctctagacaagcactacttgttgcgcagttgcctgtttcattcactacaaag
tctaactggagaggtccattccccagggagattctctccatgttctgccaccagcataga
ctagcagaccccgtcttcactatatctacggctcctgtgaaatcgttggctgagatatac
agatctcacaggaagttgaaggtctcaggaggatctgatggtggcgatgatgagaatttg
agtaaggaaaaagaggatacaccaggattagggaatggtttcagatgtgaagtgaaagtt
cttacgaagtctcaggatttggttttggagtgttcaccgagaaaattctatgagaaggaa
aacgatgccgttcaaaatgcttcactgaaggctctcttgtggtttagtaagtatttcgat
gatttggatgtgaatggatcagatacagatgatgatgaagaggataccaaatctccaggt
actcatgtttttagattcccaccgaatttcggaaacgtagaagacagctcagggaccgag
aaggtggtgccatcagtagtagagaagcgtgttcctactataacaaacggttctgtggtt
agcatctgctattctttgtctttggaagtggatcctgagttttcaactgatggagaagtc
agcgaagaagatatggagtcggaggtggatgctgattatgagcactcggtagatctcatt
gaaagccatgaagagatagagtttgagatggggactaaagccatggattcacttattgaa
tcagctgttagtcagatgactgtgggtgaatttgcttcttacaatacttcactctgtact
gcttctgaagctttgattctggctgttgccaccgatactgcgagagcccgctacctctta
tcaaaacgtccacaaattgttaacagtataattctgttgggagtgaaagggcctagtgaa
gagcgaatggaggcggcttttttcaaaccgccactttcaaaacagcgtgtggaatatgcg
gtgaaacatataaaagattcatccgcttctactttggctgactttggatgcggttctggt
agtttattagactctctacttgactatccaacaacacttcaaaccattatcggcgttgac
atctcacccaagggtctagcccgtgctgctaagatgctacatgtaaaactaaacaaggaa
gcttgcaacgtcaacactgcgacactttatgatggttccatcctcgagtttgactccagg
ctgtttgacattgacattggcacttgcttggaggtcattgaacacatggaagaagagcaa
gcttgtgagtttggtgaaaaggttctaagcttgttccgaccgaagctcctgatcgtctca
acacctaacttcgaatacaacacaattctccagcggtctactacaccagacactcaagaa
gaaaccaattctgagccgcagcttcctaaattcaggaaccatgaccacaagttcgagtgg
acaagggaacagtttaaccactgggctaccaaactcgcggaacgtcataactacagcgtt
gagtttagcggtgttggtgggtctggtgaagtggaaccagggtttgcttctcagatagct
gtgtttaaacgggaagcttcggctgttgagaatgttgcagaagggtcgatgcagccttat
aaagtcatatgggaatggaagaaaggcagtggagaaaagaaagactga
DBGET
integrated database retrieval system
