Raphanus sativus (radish): 108842048
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Entry
108842048 CDS
T06014
Name
(RefSeq) small RNA 2'-O-methyltransferase
KO
K20798
small RNA 2'-O-methyltransferase [EC:
2.1.1.386
]
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rsz03036
]
108842048
Enzymes [BR:
rsz01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.386 small RNA 2'-O-methyltransferase
108842048
Chromosome and associated proteins [BR:
rsz03036
]
Eukaryotic type
Gene silencing
piRNA pathway
108842048
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
dsRBD2
Hen1_Lam_C
Hen1_LCD
Methyltransf_12
Methyltransf_31
DSRM_2
Methyltransf_25
Methyltransf_23
Methyltransf_11
dsrm
Methyltransf_33
Methyltransf_32
MTS
Dicer_dimer
La
FKBP_C
Methyltransf_5
AviRa
dsrm_Ferlin
Motif
Other DBs
NCBI-GeneID:
108842048
NCBI-ProteinID:
XP_018470357
UniProt:
A0A6J0MD58
LinkDB
All DBs
Position
2:complement(31805386..31809769)
Genome browser
AA seq
927 aa
AA seq
DB search
MAGGENNQALSPKATIHQTFGVKASYRTEQVRVPCQNAGLYRCHLQLPEFSVISNVFKTK
NDAEQSAAELALEKLGIHPQDDITVEQAWDDIVQRIKYIFSDEFLSADHPLGSHLRATLQ
TDGERRGSVPLSVIAAFDAKINSRCKVINPSVDQDPILAMSYVMKAAAKLSDYIVVSPHV
ASLRRKNPYPPAIVEAFGHGESIQVEAVYTKCATSGEEVVDPVTLDISSGRYYLDIIAKK
LGLKDSSQLIISRTFGKTSSGYECRVYSAIPKLSPDKSSKAYGKRPVDEEDQSSHFNKPW
NAKASYVCGQDIHGDAIVAAVGYSWRSNDLEHDDVTLKSFYRMCCGMSPNGIYKFSRQAL
IAAQLPFSFTTKSTWRGPLPREMLSMFCRQQQLSEPVFTVSTAPVKPLSDILRSIKKLKD
SESDDSNHQCVNEYAGSDDSYNHYNSKDEEELPVLESGYRCEVKILSKSQDLVLDCSPGS
FYEKESHAVQNASLKALTWFSSFFDDLDADPEQGCCYTKGQMNWMFTRNIMIKGKFPSNK
RYEQPKSESKRMYMDSKRKRVQTIPNGSLVSICYSVSVEVDSDFSKTGKCLKELIESNVE
MEFEVGNGSMNPHLESVVTQMAVGQYACFVTNSPAEGLVLAAANDTVRTRSLLSEIPAGL
EYSVRLLGVKGPSEKRVEAVFFKPPLTKKRVGYAVELIKESSASTLVDFGCGSGSLLESL
LEEVPTSLQTIAGVDISQKALARAAKMLDSKLNKGACNLKSVKLYDGSILEFDSRLHGID
IATCLEVIEHMEEDEAFQLGKTLLSLFRPKLLIVSTPNYEYNRILHKSSLFHSKDKSMSQ
RCKLRNPDHKFEWTRAQFNRWASKLAKSNNYSVEFSGVGGSGNVEPGFASQIAVFRVKSF
SGVKKVSMQQPYKVIWEWTRAEGEKRN
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtggggagaacaaccaggctctgtctccaaaggcaactatacatcagaccttt
ggtgttaaagcaagttacagaacggaacaagttcgtgttccttgtcagaacgctggtctc
tatcgatgccacttgcagcttccagaattttccgttatatcaaatgtcttcaagacaaag
aatgatgctgaacaatccgctgctgaattggctctcgagaagctaggcattcaccctcag
gatgacataacggtggagcaagcttgggatgatatcgttcaacgcattaagtatatattc
tctgatgagtttctttcagctgatcatcctcttgggagtcaccttagagcaacgttgcaa
actgatggtgaacgtcgtggttcagttcctctttccgtcatcgctgcatttgatgcaaag
atcaacagtcgctgtaaagttatcaatccttccgtggatcaagatcctatcttggccatg
tcctatgtcatgaaggctgctgcaaagctatcggactacattgtcgtatctccgcatgta
gcttcactccgcaggaaaaatccataccctccagctattgtagaagcttttggacatgga
gaaagcatacaagttgaggctgtgtatacaaaatgtgccactagcggtgaagaggttgtt
gatccggtcacacttgatatctcatcaggtcggtattacttggatatcatcgctaaaaag
cttggtttgaaggatagcagccaactgattatatccaggacttttggtaaaacttcctct
ggctatgaatgtagagtatactctgccattcctaaactgagtcctgataaatcatcgaaa
gcttatggaaagcgtccagttgatgaagaagatcaatcatcacattttaataagccttgg
aatgcaaaagcaagttatgtttgtggtcaagatattcacggtgatgcgatagtggctgct
gttggttactcatggaggtccaatgatcttgaacatgatgatgtaaccctaaagtctttt
tacaggatgtgttgcggcatgtcacccaacggaatatacaagttctcccgacaagcacta
attgctgcgcagttacccttttcattcactacgaagtctacttggagaggtccactcccc
agggagatgctctccatgttctgccgccagcaacaactatctgagcctgtcttcacagtc
tctactgctcccgtgaaaccactctcagacatcttaagatccatcaagaagttgaaagac
tcagagtcagatgatagcaaccatcagtgtgtaaacgagtacgcaggatcagatgattcc
tacaaccattacaacagcaaggacgaagaggagctaccagtattagagagtgggtacaga
tgcgaagtgaagatcctctcaaagtctcaggacttggttttagactgttcaccagggagc
ttctacgagaaggagagccatgctgttcaaaacgcttcgttaaaagccttgacatggttt
agtagcttcttcgatgacctggatgctgacccggaacagggatgttgctatacgaaagga
caaatgaattggatgtttacacggaatattatgataaaagggaaatttccaagtaataaa
agatatgaacagccaaagtctgagtcaaagagaatgtatatggatagcaaacggaagcgt
gttcaaactataccaaatggttccttggttagcatatgctattctgtgtctgtagaggta
gactctgacttttcgaagactggtaaatgtttgaaagaactcatagaaagcaatgtagag
atggagtttgaagtagggaatggatccatgaatccacatcttgaatcagtcgttactcag
atggccgtgggacagtatgcttgctttgtaactaattcgcctgcggaagggttggtattg
gctgctgccaatgatactgtgagaactcgctcactcttatcagaaatcccagcaggtttg
gaatatagtgtgcgtttgttgggagtgaaagggccgtcagaaaaacgagttgaagcagtt
tttttcaagcctccgcttacgaaaaagcgtgtgggatatgcagtggaacttatcaaagaa
tcatcagcttctactttggttgactttggatgtggatctggaagtttactagagtcttta
cttgaggaggttccaacttcacttcaaaccattgccggcgtggacatctcacagaaggct
cttgcccgtgctgctaagatgctagactcaaagttaaacaagggagcttgcaacctcaaa
tctgttaaactctatgatggttctatcctcgagtttgattccaggctgcatggcatagac
atcgccacttgcttagaggtcattgagcacatggaggaagatgaagcctttcagcttggg
aaaacacttcttagcttgtttcgcccgaagcttctgattgtctccacaccaaactacgag
tacaacagaattcttcataagtcttctctgtttcactcaaaagacaaatccatgtcacag
cggtgtaagttgaggaaccctgaccacaagttcgaatggacaagagcacagtttaaccgc
tgggcatctaaactcgccaaaagcaataactacagcgtcgagttcagcggtgttggaggg
tctggtaatgtggaaccagggtttgcttctcagattgctgttttcagagtcaagtctttc
tctggagttaaaaaggtctcaatgcagcagccttataaagtcatatgggagtggacaaga
gcagagggagagaaaaggaactag
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