Raphanus sativus (radish): 108842050
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Entry
108842050 CDS
T06014
Name
(RefSeq) small RNA 2'-O-methyltransferase-like
KO
K20798
small RNA 2'-O-methyltransferase [EC:
2.1.1.386
]
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rsz03036
]
108842050
Enzymes [BR:
rsz01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.386 small RNA 2'-O-methyltransferase
108842050
Chromosome and associated proteins [BR:
rsz03036
]
Eukaryotic type
Gene silencing
piRNA pathway
108842050
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
dsRBD2
Hen1_Lam_C
Hen1_LCD
DSRM_2
FKBP_C
dsrm
Motif
Other DBs
NCBI-GeneID:
108842050
NCBI-ProteinID:
XP_018470359
UniProt:
A0A6J0ME23
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All DBs
Position
2:complement(31802406..31805357)
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AA seq
667 aa
AA seq
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MTGGEEKQALSPKEIIHQQFGGKASYRIEEVHVSSHNTCLYRCHLQLPEFSVVSNVFKEK
QDSEQSAIELALEKLGIQPRNDDYADHITVEEGLEGIVQRIKYIFSNEFLSADHPLASHL
RATLQRDGEQRRGLLPVSAIATFDSKIYSLCKVIHPSMDSDPVLVMSYVMKAAAKSWDYV
VVSPHAASLGRKNPYPPAIIEGLATHVENIRVEAVHIKCTKRDEEVVEPVVLDISSDRYY
LDVIAQKLGLEDASQVMISRAISKTFSGYECRVYSAITKLNSSSDLKKSRNAKASFVCGQ
DVHGDAIFASVGYTWKSHDLEHEDVTLKSFYRICCGMSPNGIYKISRQALIAAQLPLLFT
RESNWRGPFPREILSMFCHQQQLAEPVFTISTAPAKSMSDVLSCYNKIKDESDNQYSSRG
QAGMPGSGKGYRCEVKILSKSLDLVFDCSLKKLYEKENDAVQNAALIALSWFSMFFGDMD
EESLEPCYTDDDLDIQYNQRSRFKETFPSSRVYELPDIIRKGDLYRSRSMSMPWERKRVQ
KIANGSLVSICYSVFLKKDSKRGKSLKELIESNEGIEFEVGHGSMNPHLESVITQMSVGQ
HVRFSTGLPAEALVLAAANDTARALTLLSGLEYNVLLLGVKGPTEERMEKANIVEKVAEG
SSQPYKD
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgacgggtggggaggagaagcaggctctttctccaaaggagattatacaccagcagttt
ggtggtaaagcaagttacaggattgaggaagtccatgtttcttctcacaatacttgtctc
tatcgatgccacttgcagcttccagaattttccgttgtatcaaatgtcttcaaggaaaag
caggattctgaacaatctgctattgaattggctctcgagaagctaggtattcagcctcgg
aatgatgattatgctgatcatattaccgtggaggaaggtttggagggtattgttcaacgc
attaagtatatattttcaaacgagtttctttcagctgatcatcctcttgcaagtcacctt
agagcaacactgcaaagggatggtgaacaacgtcgtggattacttcctgtttctgccatt
gctacgtttgactcaaagatttacagtctttgtaaagtgatccatccttctatggactct
gatcctgtcttggtcatgtcctatgtcatgaaggctgctgcaaagtcatgggattacgtt
gtcgtatctccgcacgcagcttcactcggaaggaaaaatccataccctccagcaattata
gaaggacttgctactcatgtagaaaacatacgagttgaggctgtacatataaaatgtacc
aagcgcgatgaagaggttgttgagccagtcgttcttgatatctcatcagataggtattac
ttggatgttatcgctcaaaagcttggtctggaggatgctagccaagtgatgatatccagg
gcgattagcaaaactttctctggctatgagtgtagggtatactctgcaatcactaagttg
aactcttccagtgatttaaaaaagtctcgtaatgcaaaagcaagttttgtttgtggtcaa
gatgttcatggtgatgcgatctttgcatctgttggttacacatggaagtcccatgatctt
gaacatgaagatgtaaccttgaagtcattttacaggatatgttgcggtatgtcacctaac
ggaatctacaaaatctcccgacaagcattgattgctgcacagctgcctttactattcacc
agagagtctaactggagaggtccatttcccagggagattctctccatgttctgtcaccag
caacaactagcggaaccggtctttactatatctacagctcctgcaaagtctatgtctgac
gtgttaagttgttacaacaagataaaagatgagtcagataatcagtattcaagtagagga
caagcggggatgccaggatcagggaaagggtatagatgtgaagtgaagatcctctcaaag
tcgctggacttggttttcgattgttcgttgaaaaagttgtatgagaaagaaaatgatgct
gttcagaatgctgcattgatagccctctcatggtttagtatgtttttcggcgacatggat
gaagaatcacttgaaccatgctatacagatgacgacctggatattcagtataatcagagg
agtcgttttaaggagacgtttccaagtagtagagtgtatgaactccctgatattatcaga
aaaggagatttgtatagatcaaggtccatgagtatgccatgggaaaggaagcgtgttcaa
aaaatagcaaacggttctttggtgagcatatgctattctgtgttcttgaaaaaggattca
aaaaggggaaaatcgttgaaagaactcattgaaagcaatgaagggatagagtttgaggta
gggcatgggtctatgaatccacatcttgaatcagtcattactcagatgtctgtgggtcag
catgttcgtttctctactggattgcctgctgaagccttggttttggcggctgccaatgat
actgcgagagctctcactctcttgtcaggtttggagtacaatgtgcttttgttgggagtg
aagggtccaacagaggaacgaatggagaaggctaacattgttgaaaaggttgcagaaggt
tcctcgcagccttataaagactag
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