Raphanus sativus (radish): 108842103
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Entry
108842103 CDS
T06014
Name
(RefSeq) trafficking protein particle complex II-specific subunit 130 homolog isoform X1
KO
K20307
trafficking protein particle complex subunit 10
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rsz04131
]
108842103
Membrane trafficking [BR:
rsz04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
108842103
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAPPC10_1st
TRAPPC10
Foie-gras_1
NTS_TR130
bL31_N
TPR_2
Motif
Other DBs
NCBI-GeneID:
108842103
NCBI-ProteinID:
XP_018470417
UniProt:
A0A6J0MDB2
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Position
2:23417693..23425318
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AA seq
1258 aa
AA seq
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MANYLAQFQTIKNSCDRVVAAVEDVSDLWPTVKGLFEEHQPLKRAVLTNKTRNPVLVENL
PVEFILTTDARLRSRFPHEQYLYWFREPYATIVLVTCEDLDEFKNILKPRLKLIVQNDDK
EWFIVFVSKAHPSNDLATKSAKKVYAKLEVDFSSKKRERCCKLDIHGPDANFWEDLELKI
TECIRNTLERRVQFYEDEIRKLTEQRFMPIWNFCNFFILKESLAFIFEIAHLHEDALREY
DELELCYLETVNMPGKKRDFGGFDSEDDQAALLKPGSKPLTQMVHDDSFREFDFRQYLFA
CQSRLLFKLNRPFEVSSRGYSFVISFAKALTFHESVLPFCLREVWVFTACLALLDATASH
HNDGVVAPDIEKEFYRLQGDLYSLSRLKFMRLGYLIGYGTDIEKSPLNSACLSMLPWPKP
AVWPSLPPDASSEVLEKEKTILQETSRTKHFGIQRKPLPLEPSVLLRVANRRRASLSTGN
ISEIFDGRPGFTEGSGLEASPRTPSSLKVQATPMSRTNSSPGNFESPLDRPMRLAEIFVA
AEHALRLTISDHDLLKTLSSVQDFEHKYLNLTKGAAENYHRSWWKRHGVVLDGEIAAVCF
KHGKYDLAANSYEKVCALYAGERWQDLLAEVLPNLAECQKILNDQAGYMSSCVRLLSLDK
SLFSSKERQAFQSEVVNIAHSEMKNPVPLDVSSLITFSGNTGPPLQLSDGDPGNLSVTVW
SGFPDDITLDSLSLTLVATNNTDEGGQALKSSAATVLKPGKNTITFDLPPQKPGSYVLGV
VTGQIGRLRFRSHSFSKGGPGESDDFMSYEKPTRPILKVSKPRALVDLSSAVSSALLINE
AQWIGVIVRPINYSLKGAILHIDTGPGLKIEDSYGIEMERYVETDCDAGATKAEASEEDS
PVSPKRDSEVLNLCDGKIVFSEWASNVSSILWVPVRALSEKLARGSSSVTPLKQDILEGM
RTVALKLEFGVHHNQIFERTIAAHFTDPFDVTTRVANKCNDGTLVLQVMLHSLVKANLIV
LDAWLDLQDGFVHGKSDGRPTATFFPLVVSPGSRAAVVFSISIEKTIPSGKDLQVPESIL
NIKYEIHGDRAAGAHKPVDADHSGTDAERRDLVFKSAIVLQRPVLDPCLTVGFLPLPSDG
LRVGKLITMQWRVERLKELKGSEAIEQQQDEVLYEVNANSENWMIAGRKRGYVSLSEEQG
SRVVISILCVPLVAGYVRPPQLGLPNVEEANVSSNPPGPHLVCVLPPLLSSSFCVPVK
NT seq
3777 nt
NT seq
+upstream
nt +downstream
nt
atggcgaactatctggctcagttccaaacgattaagaactcctgcgatcgcgtcgtcgcc
gccgtcgaagatgtatctgatctatggcccacagttaaaggcttgttcgaagagcatcag
cccttgaagagagcagtcttgacaaacaagactcggaacccggttctcgttgagaatttg
ccggttgagttcatattaacaacagacgccaggcttcgcagtcggttcccgcatgagcag
tatctgtactggttccgagaaccatatgcaactattgttcttgtgacctgtgaggatctt
gatgagtttaagaatattcttaaaccacgtctgaaattaattgttcagaatgatgacaag
gaatggtttattgtgtttgtatctaaggctcacccaagtaatgatctagctactaaatct
gccaagaaagtatatgccaagcttgaagttgatttcagttccaaaaagagagaaaggtgc
tgtaagctggatatacatggccccgacgcaaacttttgggaggatctagaattaaagatt
accgagtgcatcaggaataccttggagaggcgcgttcaattctatgaggatgagattcgc
aaactcaccgagcagcggtttatgccaatatggaacttttgtaactttttcatcctcaag
gaaagtctggctttcatatttgagattgctcatcttcatgaagatgcattacgtgaatat
gatgaactagagctctgctatttggaaacagttaatatgcctgggaaaaagagagatttt
ggaggattcgacagtgaagatgaccaagctgcgctgctgaaaccaggaagcaaaccactg
acacagatggttcatgatgattcttttagagagtttgatttcagacagtatctctttgcc
tgtcagtctcggctgttgttcaagttgaatcgtccttttgaagtttcatccaggggatat
tcttttgttatcagctttgcaaaggccttgaccttccatgagagtgtacttcccttctgt
ttgcgggaagtttgggtgtttactgcatgtttagcgttgctcgatgcaactgcttctcat
cacaacgatggcgttgtggcacctgatattgaaaaggagttctaccgtcttcagggtgat
ctctattcactgtcacggcttaagttcatgagacttggatatctgataggatatggaaca
gacatagaaaaaagtccactgaacagtgcttgtctcagcatgctgccgtggccaaaacca
gcagtctggccatctcttccaccagatgcttcctctgaggtgcttgaaaaagaaaagact
attctacaagaaacttcaaggaccaagcactttgggatccagcggaaacctttacccctt
gaaccatctgtccttctgcgtgtggctaacagaagaagggcttctctttctactggaaat
atttctgaaatatttgatggccgcccaggctttactgaaggatcaggtttagaagcgtct
ccaagaaccccttcatcacttaaagtacaagcaactccaatgtcgagaacaaattcctca
cccggaaattttgagagtccgctagataggcctatgaggcttgctgaaatttttgttgca
gctgaacacgctctacggcttaccatttcagatcacgatttgttgaagacattgtcatct
gttcaggatttcgagcataaatatcttaatctaaccaaaggtgctgccgaaaattatcac
cgttcttggtggaagagacatggagtcgttcttgatggtgaaattgcagcggtctgcttc
aagcacgggaaatatgatttggctgcaaactcttatgaaaaagtttgtgccctttacgcg
ggtgaaagatggcaagatttgctagcagaagtcttgcccaatttggctgagtgtcaaaag
attcttaatgatcaagctgggtacatgtcatcttgtgttaggctactttcgttggataag
agcttattctcgtccaaggagcgacaagcttttcagtccgaggttgtcaatattgcacac
agtgaaatgaagaacccagttcccttagatgtgtcatcattgataacattttctggaaat
actggtcctcctcttcagttgagtgatggagaccctgggaatctatctgttactgtgtgg
agtggctttcctgatgatatcacccttgattcacttagtcttaccttggtagccactaac
aacactgacgaaggcggccaggctttgaagagttcagctgcaactgtactaaagcccgga
aagaatactatcacatttgatttgccgccacaaaaacccggttcctatgttttgggagtc
gtcactggccagattggtcgcttgagattcaggtctcacagcttttcaaagggtggtcct
ggagaaagtgatgattttatgagttatgaaaagccaaccagacctatcttgaaggtgtcc
aaaccaagagctctggttgatctttcttcagctgtatcttctgcgctgcttataaatgaa
gcccagtggattggtgtcattgtgcgtcctattaattactcactgaaaggcgccatcttg
cacattgatactggtccagggctaaagattgaagactcatacggcatcgagatggagaga
tacgtggaaacagattgcgatgctggtgcaacaaaagctgaagcttctgaagaagatagc
cctgtctctccaaaacgtgattcagaggtccttaatctctgcgacgggaaaatagttttc
tcagaatgggcaagcaatgtgagttctattctctgggtccctgttcgtgcattgagtgag
aagcttgctagaggttcatcttcagtcactccgctgaaacaagatattttagagggaatg
agaactgtggctctgaaacttgaatttggggtgcatcataaccagatatttgagagaacg
atagctgcacattttaccgacccttttgacgtgactacaagggtggcaaacaaatgcaat
gatggcacgttggtcttgcaggttatgctacactcccttgtcaaggccaacttgatagtt
cttgatgcttggcttgatcttcaagatggatttgtacatggaaaaagtgatggaagacca
actgcaacgttctttccccttgttgtgtcaccgggatctagagcagcagtcgtgttcagt
atatccatagagaagacaattccatcaggaaaagatttgcaggtaccagagagcattctg
aatatcaaatatgaaatccatggtgatagagctgctggagcacacaaaccggtggatgca
gatcactctggaactgatgctgaaaggagagatttggtgttcaagagtgctattgttttg
cagcgtccagtgcttgatccttgtctgacagttggattcctcccacttccttccgatggt
cttagggtcgggaaacttattaccatgcagtggagagtcgaaaggctgaaagagctcaag
ggaagtgaagccatagaacagcaacaagatgaggtattatacgaagtcaatgcaaattcg
gagaactggatgattgcgggtaggaagagaggttatgtctctctctcagaggagcaaggt
tcaagagtggtaatatcgatactgtgtgttccattagttgcgggttatgtccgtcctcct
cagctaggtttgccaaacgtggaagaagcaaatgtaagcagcaatccaccgggtcctcac
ttagtgtgcgttttgcctccacttctcagttcttccttttgcgtccctgtcaagtag
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integrated database retrieval system
