KEGG   Raphanus sativus (radish): 108842141
Entry
108842141         CDS       T06014                                 
Name
(RefSeq) tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like
  KO
K05544  tRNA-dihydrouridine synthase 3 [EC:1.3.1.89]
Organism
rsz  Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:rsz03016]
    108842141
Enzymes [BR:rsz01000]
 1. Oxidoreductases
  1.3  Acting on the CH-CH group of donors
   1.3.1  With NAD+ or NADP+ as acceptor
    1.3.1.89  tRNA-dihydrouridine47 synthase [NAD(P)+]
     108842141
Transfer RNA biogenesis [BR:rsz03016]
 Eukaryotic type
  tRNA modification factors
   Dihydorouridine synthases
    108842141
SSDB
Motif
Pfam: Dus zf-CCCH_DUS3L zf-CCCH_4
Other DBs
NCBI-GeneID: 108842141
NCBI-ProteinID: XP_018470461
UniProt: A0A6J0MG13
LinkDB
Position
2:40475836..40479260
AA seq 664 aa
MSDVVADAELAAETSVKEDAKAVLETVQSTKQFSVYEASSEELIERSMAPIKKEFLCPPP
PSRNLKQSDVKAAPPHPSLVQEKKSKRQLKRERREKCAINLCPQVSRTEDVNSCQYKEKC
RFNHDIEAFKAQKPDDIEGQCPFVASGMKCQYGLSCRFLGTHTHVSDENQISEINVFNKE
TQRLLWKNNMTFLKADAKLKSLGLMGHAKKSNVAEENDAHKPQNDAQATEGVDIPGPLET
EQVRPAKKAKSETSQLGDINIGVNVEDNTEKNGHSTSKPKVEDEASIKVVETDGSLKSHP
REKKKLIDFRDKLYLAPLTTVGNLPFRRLCKVLGADVTCGEMAMCTNLLQGQASEWALLR
RHSSEDMFGVQICGAFPDTVARAVELIDQECTVDFIDINMGCPIDMVVNKSAGSALLNKP
LRMKNIVEVSSSIVETPITIKVRTAFFEGKNRIDSLISDIGDWGATAVTIHGRSRQQRYS
KSADWDYIYKCTKNASPSLQVIGNGDVYSYLDWNKHKSDCPELSSCMIARGALIKPWIFT
EIKEQRHWDITSGERLNILKDFVRFGLQHWGSDTKGVETTRHFLLEWLSYTFRYIPVGLL
DVIPQQINWRPPSYFGRDDLETLMMSESAGDWVRISELLLGKVPEGFTFAPKHKSNAYDR
AENG
NT seq 1995 nt   +upstreamnt  +downstreamnt
atgtccgacgtagtagctgatgctgagctcgcggcggagacgagtgttaaagaagatgca
aaggctgtattggagacggttcaatcgacgaagcagttctcagtatatgaagcgagttcg
gaggaacttatagaacgatcgatggctcctataaaaaaagagttcctatgtcctcctcct
ccaagccgtaacctgaagcaaagtgacgttaaggcggcgcctcctcatccgagcttagtc
caggagaagaaatcgaagagacagctcaaaagggaacgccgtgagaaatgtgcgataaac
ctgtgtccacaggtttcgagaacagaagacgttaattcctgtcagtacaaagagaaatgc
cgatttaatcatgacattgaagctttcaaagctcagaaacctgatgatatagaggggcaa
tgcccatttgtggcctctggaatgaagtgccaatatggtttatcatgccgattcttaggc
actcacacacatgtttctgatgagaaccaaatctctgagattaacgtttttaacaaagag
acacagaggcttctatggaaaaataacatgacttttctcaaagctgatgccaaacttaaa
tcccttggccttatggggcatgccaagaaaagcaatgttgctgaagagaatgacgcacat
aaacctcaaaatgatgctcaggcaactgaaggtgttgatattcctgggccattggaaact
gaacaagttcgtcctgcaaaaaaggcaaaatcggagacttctcaacttggagatattaat
attggggtgaatgtggaagataacacggaaaagaacgggcattctacttcaaaacccaaa
gtagaggatgaggctagcatcaaagttgttgaaactgatgggagcctaaaatctcaccct
cgtgagaagaaaaagcttattgattttagggataagttgtaccttgcacccctaacaacc
gtgggcaatcttcccttcagaagactttgcaaagtattgggagcagatgtgacttgtggt
gagatggctatgtgtaccaatcttttgcagggccaagcttcggaatgggctctgcttaga
aggcattcatcggaagatatgtttggtgttcagatttgcggtgcttttcctgacacggtg
gctcgtgcggttgagcttatagatcaagaatgcacggttgatttcatagacatcaacatg
ggctgcccgatagatatggttgttaacaaaagtgctggttcagctcttctcaacaaacca
ttacgaatgaagaacatcgtggaagtctcttcttccattgttgaaacaccaatcactatc
aaggtacgcactgcatttttcgagggtaagaaccggatagattcattaatttcagatatt
ggggattggggagccactgcggtgacgattcatgggcggtcaagacaacaacgttatagc
aagtctgcggattgggactatatatacaagtgtaccaaaaacgcttcccctagcctacaa
gttataggaaatggagatgtgtactcttatttagactggaacaaacacaagtctgactgt
cctgagttgtctagctgcatgattgctcgtggagcactgatcaagccttggatatttact
gaaattaaagagcaacggcattgggacattacctccggggaaagacttaacatcttaaag
gacttcgtacgttttggtcttcaacattggggatccgacacaaaaggagtagagacaaca
aggcatttcttgctggagtggctaagctacacgtttaggtacatacctgtaggtctactg
gatgtgatcccgcagcaaatcaactggcgtccgccttcttattttggtcgtgatgatctc
gaaacgctcatgatgtctgaatctgcgggtgactgggtgaggatatcggaattgctgctt
gggaaggttccagaaggcttcacgtttgcacccaagcacaaatccaacgcttatgaccga
gctgaaaatggctaa

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