Raphanus sativus (radish): 108842214
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Entry
108842214 CDS
T06014
Name
(RefSeq) proline--tRNA ligase, chloroplastic/mitochondrial
KO
K01881
prolyl-tRNA synthetase [EC:
6.1.1.15
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
108842214
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rsz01007
]
108842214
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rsz03016
]
108842214
Enzymes [BR:
rsz01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.15 proline---tRNA ligase
108842214
Amino acid related enzymes [BR:
rsz01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
108842214
Transfer RNA biogenesis [BR:
rsz03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
108842214
Prokaryotic type
108842214
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
ProRS-C_1
HGTP_anticodon
DUF348
Cytochrome_P460
Motif
Other DBs
NCBI-GeneID:
108842214
NCBI-ProteinID:
XP_018470558
UniProt:
A0A6J0MF54
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Position
2:complement(24462317..24465376)
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AA seq
539 aa
AA seq
DB search
MVASLRLPSLTSLLFPATTRYPAALRRRVLCPRNRPASGFATAPSGTAASPEVHRLRSDQ
AVTPRSQDFNAWYLDVIASAELADYGPVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSN
MYFPQFIPYSFIEKEASHVEGFSPELALVTVGGGHELEEKLVVRPTSETIVNHMFTQWIH
SYRDLPLMINQWANVTRWEMRTKPFIRTLEFLWQEGHTAHATPEEAEKEAKQMIEIYTRF
AYEQTSIPVIAGRKSKLETFAGADTTYTIEAMMGDRKALQAGTSHNLGQNFSRAFGTQFQ
DENGERQHVWQTSWAVSTRFVGGIIMTHGDDTGLMLPPKIAPIQVVIVPIWKKDTEKTEV
LSAASSVKEVLQTAGVRVKLDDTTERTAGWKFNFWEMKGVPIRIEIGPRDVSSNCVVVSR
RDIPGKAGKVFGISMEPSTLVAYVKEKLDEIQSSLLEKAISFRDSNIVDVNSYEELKAAI
ASGKWARGPWSASDSDEQRVKEETGATIRCFPFEQTLGSKTCLMTGNPAEEVAIFAKSY
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggtggcttctctcagactcccttctctcacctccctcctctttcccgccaccactcgt
tacccagcagctctccgccgaagagtattatgtccacggaaccgacccgcttctggattc
gcgacggctccgagcggcactgctgcttcgccggaggttcatcggctgaggtcggaccaa
gccgtaacgcctcggtcgcaggacttcaacgcttggtatctggatgtcatcgctagcgca
gagctcgctgactacggtccggtccgtggcacgatggtgattcgtccctacggttacgcc
atctgggaagcgattcaggactacttgaatgtgaaattcaaagagactggccatagcaac
atgtacttcccacagtttataccatactcgtttattgagaaagaagcttcacacgttgag
ggatttagtcccgaactagcccttgtcactgttggtggaggacatgaacttgaagagaag
cttgtggttcggcctaccagtgaaaccattgtgaatcacatgttcacccagtggattcac
agctatcgtgatcttcctctcatgatcaatcagtgggccaatgtcactagatgggagatg
cggacaaaaccatttattaggactcttgaatttttgtggcaagagggtcacactgctcat
gccactcctgaggaggcagaaaaagaggcaaaacagatgatcgagatctacaccagattt
gcttatgagcaaacttccatacctgtaattgcaggtcgaaaatcaaagctagagaccttt
gctggtgctgatacaacctacactattgaggctatgatgggagatcggaaggctttgcag
gctggtaccagccacaacttagggcaaaacttttctcgtgcttttggaactcagttccaa
gatgagaatggggaaaggcaacatgtgtggcagacatcatgggcagtcagtacacgtttt
gtcggtggcatcatcatgactcatggagatgacactggtcttatgcttcctcccaagata
gctccaatacaggtagtgatcgtacctatttggaaaaaagacactgagaaaacagaagtt
ctcagtgctgcatcatcagtgaaggaagttcttcaaactgctggggtcagagttaaactt
gatgacacaaccgaacgaaccgcagggtggaagttcaatttctgggaaatgaagggagtc
cctataaggattgagattggtccacgcgatgtatccagcaactgtgttgttgtctcgagg
agggacataccaggaaaggcaggaaaagtatttggaatatcaatggagccatcaacgtta
gtagcatacgtgaaagagaagttagatgagatccaatcatcacttcttgagaaggcaata
tcattcagggatagtaacatagtggatgtgaactcatacgaggagctcaaagctgcgatt
gcttcagggaaatgggcaagaggtccatggtcagccagtgactcagatgagcaaagggta
aaggaggaaacaggtgcgaccattcggtgttttccatttgaacagactctaggaagcaaa
acatgtctgatgactggtaatccagcagaggaagttgctatctttgccaagtcttactaa
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