Raphanus sativus (radish): 108842295
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Entry
108842295 CDS
T06014
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 16
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rsz01002
]
108842295
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rsz04121
]
108842295
Enzymes [BR:
rsz01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
108842295
Peptidases and inhibitors [BR:
rsz01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
108842295
Ubiquitin system [BR:
rsz04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
108842295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
zf-MYND
Motif
Other DBs
NCBI-GeneID:
108842295
NCBI-ProteinID:
XP_018470663
UniProt:
A0A6J0MFF4
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All DBs
Position
2:complement(33447177..33452257)
Genome browser
AA seq
1024 aa
AA seq
DB search
MLLVLDLGLTSLVLVISLLLLPLTGFVVVRRKWRLAALRREEIRRLLIHASEEAARVELE
ASVEFSFVPVTTNSFYCPVCFSPALTRCSRCKAVRYCSGKCQIIHWRQGHKDECQPASIV
YNTDDEKSDSDLKFGEGNEGLTVDETLLLHSEVETVPIREGILSSTSRSSEDVNGESVDN
RDDVIDKEEAVSVAETSGSSFSSFSSSPRNDSSDDTSLGECLSSSDSERSEQPLLDAHVS
VASEETCFSIIDDVPSKPLSPKFVHLVESVDNLANLPKLNLVKPGGDAGQNQRQSSSLPS
LVPDRHPGSAQPKSADPSLLKSSDFWGTALASAECVSESSKSGEPGKSSLHVSFGPSRDT
SAAKFSELRKFISEETHRAASGTPNFYDELNRKERNAKRSDEAEISLTSSSSIKAPRPLN
PTGLSTVTLRKSKSTSTGSGVVLAPLKVAEVQLLASKASKARESPDVAKQSAVGAKSGTV
LDHQKQNGVADHRITSLNGKNGLKASVLKVVDQWTKPKSLAENEMEGRHGHKGLFSYELF
LKMYTIKTELQPCGLINSGNNCFANVVFQCLMFTPPLTTYFLQQHHSRACPNKEQCFTCG
FENLVLKATEGKSPLSPNGLLSQLHNIGISLGNGKQEDAHEFLRFVVDTMQSVCIKASEY
DMPKTRKLEDTTLIGLTFGGYLRSKIKCMNCQEKSERREKMMDLTVEIDGDISTLEDALR
RFTRTEILDGENKYKCGRCKSYERAKKKLKITEPPNVLTIALKRFQSGKFGKINKLVRFP
ESLDLAPYVSGGSEKSHDYKLYGVIVHLDIMNAAFSGHYVCYVRNSQNKWYKADDNTVVT
SDVERVLTKGAYMLFYARCSPIPPKLVVCNKTEASTNKKRSVPPLVPKTSVSRSVSTANP
VCSSNTPGGDRSGNIQSFYSSFQRLQRILEEDSSSDSSSLFDSNSDECSCSTDSTSMDDF
ADFIFGDHQGRAPGQSETPSPTSSSSSSPSPPFTRHSRLRDSSLNSPETCRASRHRHLPV
GGEK
NT seq
3075 nt
NT seq
+upstream
nt +downstream
nt
atgctcctcgtcttggatctagggcttactagtctagtccttgtgatctctctcctcctt
ctacctctcaccggcttcgttgttgttcgacgcaaatggaggctcgcggctctaagaagg
gaggagatccggagacttcttattcacgcttccgaggaagctgctagggtagagctagag
gcctctgttgagttctcttttgtccccgtcactactaatagcttctattgccctgtttgc
ttttctcctgccttgactcggtgctctcgttgcaaagccgttcgttattgttccgggaaa
tgtcaaatcattcactggcggcaaggtcacaaagatgagtgtcagcctgcgtccatcgta
tataatacggacgatgagaagagtgactctgatttgaaatttggagaaggaaacgaaggt
ttgactgttgatgaaactttgttgctgcattcggaagtagagactgtaccaatcagggaa
gggatactttctagtacttccagatcttctgaagatgtgaatggagaaagtgtagataac
agagatgatgttatagataaggaagaagctgtttctgttgctgaaacatctggatcctcc
ttctctagcttttcctcctcaccccgtaatgactctagtgatgatacttctcttggtgag
tgccttagttcgtctgattccgagagatcggagcagcccttgctggatgctcatgtttct
gtagcgtcagaggagacatgtttcagcattatcgacgatgttccatccaagccgctgtct
cctaaatttgtgcatttggttgagtccgtagataacctcgctaacttgcctaaactgaat
cttgttaagcctgggggtgatgctgggcagaaccagagacaatcaagtagcttaccctca
ttagttccggatagacatccaggatcagctcaaccaaaatcagctgacccgtctcttctg
aagtcgtctgatttttggggtacggctcttgcatcagcagaatgtgtaagtgaaagttct
aaatctggtgaacctggtaaatcctctctgcatgtatcctttggcccttctagagacacc
tcagctgcaaaattctctgagcttagaaaattcatttcagaagaaactcacagggctgca
tcagggactccaaatttttatgatgaattgaatagaaaagaaagaaatgctaaaagatct
gatgaggctgaaatttcactaacaagttcgtcttctatcaaggcgccacgccctttgaat
cctactggtttgtccactgtgacccttcgtaagtcaaagagcaccagtactggaagtggc
gtagtgttggcccctctgaaggttgcggaagtccaacttttggcatccaaggcctcgaag
gcgagggagagtcctgatgttgcgaaacaatctgctgtaggtgcaaaatctggaacagtt
cttgaccatcagaaacaaaatggtgttgccgatcaccgtataacttctctaaatgggaaa
aatggtttgaaggcatcagtactgaaagttgtagaccagtggactaaaccgaagtcatta
gctgagaatgagatggaaggaagacatggtcataaggggctcttttcatatgaattattt
ttaaagatgtataccattaaaactgagctccagccttgtggcctcatcaattccggcaat
aactgttttgctaatgttgtctttcaatgcctgatgttcactcctcctttgaccacatac
tttctccagcaacatcattctagagcatgtccaaacaaagaacaatgcttcacctgtggg
tttgagaatctggtcttaaaggcaacagaaggaaagtctccactgtctcccaatgggttg
ctgtcacagctgcataatatcggaatctctcttgggaatggcaagcaagaagatgcacat
gaattccttaggtttgttgtcgatacaatgcagtcagtgtgtatcaaggcgtctgaatac
gatatgccaaagactaggaaactagaagatacaactctaattggtttgactttcggcgga
tacctccgttcaaagattaaatgcatgaactgtcaagaaaaatctgagcggcgtgagaaa
atgatggatctaacggttgagattgatggggatattagcaccttggaggatgctttgcgt
cgatttacaaggactgaaatattggatggagaaaacaaatacaaatgtggcaggtgtaaa
tcctacgagagagccaaaaagaaactgaaaattacagagcctccgaatgtgcttacgatt
gcactaaaacgattccagtcagggaaatttgggaagatcaataagttggttaggtttcca
gaatcgctggatttggctccatatgtcagcggtggaagtgaaaaatcacatgactacaaa
ctctatggagtgattgttcacttggatataatgaatgcagcattttctggccactatgtc
tgctatgttagaaacagtcaaaacaagtggtacaaggctgatgataacacggtggtaact
tctgatgttgaaagggtcttgacaaagggagcttatatgctgttctacgcaaggtgttct
ccaattcctccaaaattagtagtatgtaataaaacagaagcatccaccaataaaaaacgc
agtgtgccaccgctggtacctaagactagtgtgtcacggtctgtgtctaccgcaaatcct
gtgtgttcttccaacactcccggtggtgaccgatctggcaatatacaatcattttattcc
agcttccagaggctgcagagaattttagaagaggactcgtcgagtgacagttcttctctc
tttgacagcaactcagatgaatgctcttgcagcacagacagtacaagcatggacgacttc
gctgacttcatttttggtgatcatcaaggacgggctcccggacagtctgagactccctct
ccaacatcatcatcctcttcctcgccttctcctcccttcacaaggcattcgcggctacgt
gactcaagtcttaattctccagaaacttgccgtgcctccagacatcgtcacttgccagtg
ggaggagaaaagtaa
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integrated database retrieval system
