Raphanus sativus (radish): 108842344
Help
Entry
108842344 CDS
T06014
Name
(RefSeq) class V chitinase
KO
K01183
chitinase [EC:
3.2.1.14
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz00520
Amino sugar and nucleotide sugar metabolism
rsz01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
108842344
Enzymes [BR:
rsz01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.14 chitinase
108842344
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_18
Methyltransf_34
Motif
Other DBs
NCBI-GeneID:
108842344
NCBI-ProteinID:
XP_018470723
UniProt:
A0A6J0MFL9
LinkDB
All DBs
Position
2:complement(31466892..31468770)
Genome browser
AA seq
380 aa
AA seq
DB search
MSSAKPISLLVSITFFFSLLLSTSSAQSVVKASYWFPGSEFPVTDIDSSLFTHLFCAFAD
LNSQTNQVTIASASQQKFSTFTQTVQRRNPSVKTLLSIGGGAADKTAFASMASNPTSRKS
FIDSSIRLARSNGFHGLDLDWEYPSSAAEMSNFGTLLREWRSAVVAEASSSGRQRLLLAA
AVFYSNNYYSVLYPVQAVADSLDWVNLMAYDFYGPGWSRVTGPPAALYDPSNAGPRGDAG
VRSWTQAGLPAKKAVLGFPYYGYAWTLSNANSHSYYAPTTGAAISPDGSIGYGQIRKFIV
DNRATTVYNASVVGDYCYAGTTWIGYDDNQSIVTKVRYAKQKGLLGYFSWHVGADDNSGL
SRAATRAWDAAATTRTIQKF
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccgccaaacccatctcgctccttgtctctatcactttcttcttctccctcctc
ctcagtacatcctccgctcagtccgtcgttaaagcttcctactggttcccgggaagtgag
tttcccgtcacagacattgactcgtctctcttcacccacctcttctgcgccttcgctgac
ctcaactctcaaaccaatcaagtcaccatcgcctccgcgagccaacagaagttctccacc
ttcactcaaaccgtacaacggcgaaacccttcggtcaaaacccttttgtccatcggcggt
ggagccgctgataaaacagcgtttgcgtccatggcaagtaaccccacttctcgaaaatct
ttcattgattcttcgataagacttgcgaggtcgaatggcttccacggtcttgacctagac
tgggagtatccgagcagtgccgcggagatgagcaacttcgggacgctgcttcgagaatgg
cgatcagcggttgtagcagaagctagtagcagtggtagacagcgtttgcttttggcggct
gcggttttctactccaacaattactattcggttctgtatccggttcaagccgttgccgac
agtctggattgggttaatcttatggcctatgacttttatggaccgggttggtctagagta
accggtccacctgccgctttgtatgacccttcaaacgcaggtccaagaggagacgctgga
gtgagatcatggacacaagctggacttccagcgaagaaagcagtcttgggatttccatac
tacggctacgcatggactctctcaaacgcaaacagtcacagctactacgcgcctacaacc
ggagcggctatatcaccggacggttctatcggatacggtcagataaggaagtttatagtg
gacaacagagcgacaacggtttataacgcctcggtggtcggagattactgttacgcaggg
acgacttggattggatacgatgataatcagagtatcgtgaccaaagtgagatacgctaag
cagaaaggtttgcttggttacttctcgtggcatgtgggagctgacgataattctggtcta
tctcgtgcagcgacacgtgcatgggatgctgcggcaaccaccagaactatacagaagttt
taa
DBGET
integrated database retrieval system