Raphanus sativus (radish): 108842434
Help
Entry
108842434 CDS
T06014
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear poly(A) polymerase 4
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108842434
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsz03019
]
108842434
Enzymes [BR:
rsz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
108842434
Messenger RNA biogenesis [BR:
rsz03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
108842434
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
Nrap_D2
Motif
Other DBs
NCBI-GeneID:
108842434
NCBI-ProteinID:
XP_056860353
UniProt:
A0A9W3DAC0
LinkDB
All DBs
Position
2:36951644..36980851
Genome browser
AA seq
739 aa
AA seq
DB search
MMVGTQRVDGGSVVNSPKSYGITKPLSLAGPSPADFKRNLELEKYLVDEGLYESEEDTMR
REEVLGRIDQIVKHWVKQLTQQRGYTDQMVEEANAVIFTFGSYRLGVHGPGADIDTLXVG
PSYVNREEDFFIILHDMLAEMEEVTELQPVPDAHVPVMKFKFQGISIDLLYASISRLVVP
QDLDISNSSVLCDVDEPTVRSLNGCRVADQILKLVPNFEHFRTTLRCLKYWAKRRGVYSN
VTGFLGGVNWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPXPVMLCAIEEDELGFPV
WDPRKNHRDRYHLMPIITPAYPCMNSSYNVSQSTLRVMTEQFQFGNNILQEIELNKQHWS
SLFEQYMFFEAYKNYLQVDIVAADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPXP
NEYVDTSRXFLHCAFFXGLQRAEGVGGQDCQQFDIRGTVEEFRQXVNMYMFWKPGMDVYV
SHVRRRQLPSFVFPIGYRRPRPSRHQNQPGVKSGEDGTVSNSVVERQVKRKNDNEMMDAR
PEKPEKRASLSPHSLDIVSPDNSAITTGCTPPVCDLGTPPGEGIEAANLNTESAELANFA
RDECNSGSEQALEVDSMALVQECSDPAEAYGKCVTPDSSDVVATASGQEENLDRDLMSVS
ISCCRWDSSFPATKSDPFVGKGNLYSXSGIPEDLQSKSLVSGMEKAEDGARSDSLQKSQI
RQNHDVFILLFFFCFVVLL
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgatggtgggtactcaacgtgtagacggcggctcggtggtgaattcccctaaaagctat
gggattacgaagcctctctcgcttgctggcccttcccctgctgatttcaagcgtaacctc
gagctcgagaagtacttggttgacgagggactatatgagagcgaggaggataccatgaga
agagaggaagttctcgggcgcattgatcagattgtgaagcactgggtcaagcagttaacc
caacagagggggtatacggatcaaatggtggaggaagcaaatgctgtcattttcaccttt
ggttcttaccgacttggagtacatgggcctggggctgacattgacactctgngtgttggg
ccatcttatgttaaccgggaggaggatttctttataatcttgcatgatatgttggctgag
atggaagaagtgactgaacttcaacctgttcccgacgctcatgttccggtcatgaaattt
aagtttcaaggaatatcgattgatctgctctatgctagcatatcacgcttagttgtgcca
caggatctcgatatatccaactcttctgtgctgtgtgatgttgatgagccaaccgttagg
agtcttaatggttgtagagttgctgatcagattcttaaactcgttccaaattttgagcac
tttcggacaacattaagatgcctgaagtactgggctaagaggcgtggagtctattcaaat
gtgactggatttctgggcggtgtaaactgggcactcttggtggctcgtgtgtgccagctc
tatccaaatgcaattcctagtatgcttgtttctcggtttttcagagtatatactcagtgg
cggtggccanaaccggttatgctttgtgctattgaagaggatgagcttggatttcctgtt
tgggaccctcgcaagaaccatcgcgatcgatatcaccttatgccaataatcactccagcg
tacccatgcatgaattctagttacaatgtctctcagagcactcttcgcgttatgacagag
cagttccagtttggtaacaatatcttgcaagagattgaattaaacaaacagcactggagc
tctttatttgaacaatatatgttcttcgaggcatataaaaactacctgcaggttgatata
gtagcagcagatgcagaggatttattggcgtggaagggttgggtggagtcacggttcaga
cagctgaccttaaagatagaaagagacacaaacggaatgttaatgtgtcatcccnaacca
aatgagtatgtcgacacgtctaggnagtttctgcattgtgcatttttcnatggcttgcag
agggcagagggagttggtggtcaagactgtcaacagtttgatatccgtggtacggtcgag
gagttcagacagnnagtaaacatgtatatgttctggaagcctgggatggatgtttatgtt
tctcatgttcgtagacgacagcttccatcttttgttttcccaattggatacagaaggcca
cggccttctaggcaccaaaatcaaccgggtgtaaaatctggtgaagatggtacagtttcc
aactctgtggtggagaggcaggtgaagagaaagaacgataatgaaatgatggatgctcgg
ccagagaaacctgagaagcgcgcatctctcagtccacacagtttagacattgtttctcct
gacaatagtgctatcactactggctgtactcctcctgtatgtgaccttggtacacctccg
ggtgagggaattgaggctgcaaatttgaacactgagagtgctgaactcgcaaactttgct
cgagatgagtgtaactctggcagcgagcaagctctggaagtagatagtatggctcttgtt
caggaatgctctgatccggctgaggcttatggaaagtgtgtgacacctgattctagtgat
gtggtagcaactgcaagtggtcaggaagaaaacttagatcgtgatttgatgtctgtatcg
atcagttgttgtcgatgggattcgagttttcctgctacaaagtcggatccttttgttgga
aagggaaacttgtactctnaaagtggcatacctgaagaccttcagtcaaagtcattggtc
agcgggatggagaaggcagaagacggagctaggtcagactctttgcagaagtcacagata
aggcaaaatcatgatgtctttatattattgttttttttttgtttcgtggtgcttttatag
DBGET
integrated database retrieval system
