Raphanus sativus (radish): 108842520
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Entry
108842520 CDS
T06014
Name
(RefSeq) uncharacterized protein LOC108842520
KO
K15691
E3 ubiquitin-protein ligase RFWD3 [EC:
2.3.2.27
]
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rsz04121
]
108842520
Enzymes [BR:
rsz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108842520
Ubiquitin system [BR:
rsz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108842520
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_RFWD3
zf-RING_2
zf-C3HC4
zf-RING_UBOX
zf-rbx1
zf-ANAPC11
CDC45
zf-C3HC4_3
zf-C3HC4_2
zf-C3HC4_4
Beta-prop_SPT8
zf-RING_11
Beta-prop_NOL10_N
Motif
Other DBs
NCBI-GeneID:
108842520
NCBI-ProteinID:
XP_018470956
UniProt:
A0A6J0MHF6
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Position
2:complement(25202395..25206145)
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AA seq
626 aa
AA seq
DB search
MPPRRRYAFRGGGVTIEDFDEEDEQHYYEEEADDTEEEEEEEEEDEETEEEEEGEEDESQ
TRVVHTSVMSHTPIVVSEDESEEKEKQIRSQGVCSTSGSQVEEEDAAAWKPTEAEGTSCL
ICMEVWTNGGEHQVCCLPCGHLYGFSCIKKWLKQPRSAGKCPQCNRTCGLRDVRKIFASR
IAAVDDDAHKRILFLEGKLNLFEQKTATWSSKEAQWRKREAELRSEVNKLKRKIAYMEIT
TSGALRESNVASQEKYEPGQKIYQEKNGLAPSCSFRHQGERLVNGGRIFDIDGGRQILLL
ARRLSGVGGTFVLSQMSLHSGEIDDIMLPPTTRAIKDLHISPHNNGLAVFGSLGKKLSVI
SLESHNTVLSYDLPAAPWSCSWDRNSSHHIYAGLQNGMVLMFDMRQTMRPLASFTGLSSN
PVHTIHHLSANSTPTTDVCSLLSASSIGLCQWNINGSEGRPSLVSETGNPGVCISSSYCP
GSDHVVASYRPRVGSSDDNVSTQPTLTQTGANTIGVDGFHVCLKRRGVDSCYQKLSSTHA
SVDTIRLPRTAIIDFGEGGKKQLFASCEESTRQLILQDPSTFTVSQRFSLASHHPLQDVK
YANMNGYTLVGLLTDDRLQLLRNESS
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgccgccccgccggcgttacgccttcagaggtggcggagtaacaatcgaagatttcgat
gaagaagacgaacaacactactacgaagaagaagcagacgacaccgaagaagaagaggaa
gaggaagaggaagacgaagaaaccgaagaagaggaagagggagaagaagacgaaagccaa
accagggtagtacatacatctgtgatgtcacacacgcctatcgtggtttcggaggacgag
agtgaagagaaagagaagcagataaggtcacaaggagtttgttcgacttcaggatcgcag
gtggaggaggaagatgcggcggcatggaaacctaccgaggccgagggaacatcgtgccta
atttgtatggaagtttggaccaacggtggcgaacatcaagtctgctgtcttccttgtggg
cacttgtatggattttcttgcatcaagaagtggttaaagcagccgcgtagtgcaggaaag
tgtccccaatgcaataggacatgtggtcttagagatgtccgcaaaatctttgcatcaagg
attgctgcagttgatgatgacgcacacaagagaatcttattcctcgagggtaaattaaat
ttattcgaacagaagactgctacttggagtagcaaagaagctcaatggagaaaaagagaa
gcagagctacgatcagaagttaataagctgaaaaggaagatagcttatatggaaatcacg
actagtggtgcactgagagagtctaacgtggcttctcaagagaaatatgaacctggccag
aagatctaccaagaaaagaatggactggcaccttcttgcagcttcaggcatcagggtgaa
cggctagttaatggtggccgtatatttgacatagatggtggtaggcagattttgttattg
gcacgtaggctctcaggcgttggtggaacgtttgtgctctcgcaaatgagcctacattct
ggtgagattgatgacattatgctgcctcctaccactagagcaataaaggatcttcacatc
tccccacacaataatgggcttgcagttttcggctctctaggaaaaaaattatcagttata
agcttggagagccacaacactgtcttatcttatgatctaccagctgcaccttggtcttgt
tcttgggatcgcaacagctctcaccatatttatgctggactacagaacggaatggtttta
atgtttgacatgcgtcagaccatgcgaccattggcatcgtttactggcttatcaagcaat
ccagttcatactatccatcatctctctgctaactccaccccaactaccgatgtatgttct
ctcttgtccgcttcttccatcgggctttgtcagtggaacattaatggcagcgagggaagg
ccatcactggtttctgaaactggaaacccaggagtttgcatatcctcctcttattgtcct
gggagcgatcatgtagttgcgtcttatagaccgagagttggatcttctgatgataacgtc
tctactcagcctacgttgacccaaacaggagctaacaccatcggtgtagatgggtttcat
gtttgtctgaagagacgaggtgttgattcttgctatcagaaactttcatccacacatgct
tccgtggataccatccgtttgccaagaacagcgattatagactttggtgagggaggaaag
aagcagctttttgcatcttgtgaggagtccactcgccagctcatcttgcaagatccttcg
acttttaccgtctctcaaaggttctcattggcaagtcatcatccgcttcaggacgtgaag
tacgctaacatgaatggttacactctggtcggtctcttaacggatgatagattgcagctt
cttaggaacgaatcttcatga
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