KEGG   Raphanus sativus (radish): 108842683
Entry
108842683         CDS       T06014                                 
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein LOC108842683
  KO
K13431  signal recognition particle receptor subunit alpha
Organism
rsz  Raphanus sativus (radish)
Pathway
rsz03060  Protein export
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    108842683
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:rsz02044]
    108842683
Secretion system [BR:rsz02044]
 Sec (secretion) system
  Eukaryotic Sec-SRP protein
   108842683
SSDB
Motif
Pfam: SRP-alpha_N SRP54 SRP54_N AAA_22 AAA_17 MMR_HSR1 AAA_30 AAA_16 AAA_19 TPP_enzyme_M DUF5693 Zeta_toxin MeaB AAA_33 SPOUT_MTase CbiA ETF CLP1_P T2SSE NACHT AAA_28 CopC
Other DBs
NCBI-GeneID: 108842683
NCBI-ProteinID: XP_018471167
UniProt: A0A6J0MGW9 A0A6J0MFC8
LinkDB
Position
Unknown
AA seq 626 aa
MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGEVSFNYESYTLKWTFH
NDLGLVFVAVYQRILHLLYVDDLLSMVKESFSEIYDPKRMSYDDFDERFRQLREEAEARG
EELRKVKPVSSVKKQGQVSKSGLDGGKKSGGSKKDDGDGNKDKVGSLMMTNGHSNGNHKM
EDDADKTDLANGKENTADNVVLDPSKLMKLRSKGVRGRGGLRKTDSIGNKSSKVTAAEPP
KKATKKNRVWDDAAPKQVKLDFTDSVDESGNGDHVDVVAADQGESMMDKEEVFSSDGESE
DGDDDDEPRSDEKPEAKKKGWFSSVFQSITGKANLERTDLEPALKALKERLMTKNVAEEI
AEKLCESVEASLEGKKLASFTRISSTVQGAMEDALIRILTPRRSIDIMRDVHAAXEQRRP
YVVVFVGVNGVGKSTNLAKVAYWLQQHKVSVMMAACDTFRSGAVEQLRTHARRLQIPIFE
KGYEKDPAVVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVG
EALVGNDAVDQLSKFNQKLSDLSNSGTTRLIDGILLTKFDTIDDKVGAALSMVYISGAPV
MFVGCGQSYTDLKKLNVKAIVKTLLK
NT seq 1881 nt   +upstreamnt  +downstreamnt
atgttagaacagctattgatcttcacacgaggaggactaatcctctggacatgcaaggag
ctcggcaacgctctcaaaggctcacccatcgacactctgatccgctcctgtctcctcgag
gagcgatccggcgaagtctccttcaactacgagtcctacactctcaagtggaccttccac
aacgacctcggcctcgtcttcgtcgccgtctatcagcggatcctccacctgctctacgtg
gacgacctgctttccatggtcaaggagagcttctccgagatctatgatcctaaacggatg
agttacgatgatttcgatgagaggtttaggcagcttagggaggaagctgaggcccgtggg
gaggagctgaggaaggtgaagcctgtgagcagtgttaagaagcaagggcaggtgtcaaag
tctggtcttgatggaggaaagaagagtggtggatcgaagaaggatgatggagatgggaat
aaagataaagtcggtagcttgatgatgactaatggtcactccaatgggaatcataagatg
gaagatgacgctgacaagactgatcttgctaacgggaaagagaacacggctgataatgtt
gtacttgatccgagtaagcttatgaagctgaggagcaaaggtgtgaggggtagagggggt
ttgaggaaaactgacagtataggtaataaaagttccaaggttactgctgcggaaccgccg
aagaaggcgaccaagaagaatagggtttgggatgatgcggctcctaaacaagtgaagttg
gactttacggactccgttgatgagagtgggaacggtgatcatgtggatgttgtggctgct
gaccaaggagagagtatgatggacaaggaagaggtttttagcagtgatggtgaaagtgaa
gatggtgatgatgatgacgaaccaagaagtgatgagaaacctgaggctaagaagaaggga
tggttttcttcggttttccagagtattactgggaaggcgaatcttgaaaggacagacctt
gaacctgccttgaaagctctgaaggagcggctgatgaccaagaatgtggctgaagagata
gctgagaagctttgtgaatcggtggaagcaagtcttgaaggaaagaagttggcatcgttc
acgaggatctcctcaaccgttcagggagcaatggaggatgctctgattcgcatattgact
ccgagacgctccattgatataatgagagacgttcatgctgccnaagaacagaggaggcct
tatgtggtcgtgtttgttggagtcaacggagttgggaaatccaccaatcttgccaaagtt
gcgtattggcttcagcagcataaggtcagtgtaatgatggctgcttgtgacacattccgt
tctggtgctgttgagcagttgaggactcatgctcgtaggttacagataccgatctttgag
aagggttatgagaaggatccagcagtagttgcaaaggaagccatacaggaagcaacccgg
aacggatcggatgttgttcttgttgacacagctggtcggatgcaggataatgaacctttg
atgagagctctctcaaagctcattaacctcaataaaccagacctggtcttgtttgtcggt
gaagctcttgttggaaacgatgcagttgatcagctctcaaagtttaatcagaaactttcg
gatctctccaattctgggaccacaagattgattgatggaatcttactgacaaagttcgat
accattgacgataaggttggagcagcgttatcgatggtttacatatcgggagcaccggtt
atgttcgtgggttgtggccagtcttacactgacctgaagaagctcaatgtcaaagccata
gtcaagacacttctcaaatga

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