Raphanus sativus (radish): 108842786
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Entry
108842786 CDS
T06014
Name
(RefSeq) cyclic nucleotide-gated ion channel 1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
108842786
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rsz04040
]
108842786
Ion channels [BR:
rsz04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
108842786
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Motif
Pfam:
Ion_trans
cNMP_binding
IQ
Motif
Other DBs
NCBI-GeneID:
108842786
NCBI-ProteinID:
XP_018471312
UniProt:
A0A6J0MFT1
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Position
2:24190819..24194233
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AA seq
712 aa
AA seq
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MNFRQEKFVRFQDWKSDKTSDAEYSGRNEPPQPNGILRRTITSISDKLHRSSASFRRSYK
SYSFKESLSRWIHSSRKILDPQGPFLQKWNKIFVLACIIAVSLDPLFFYVPVVDDAKKCL
GLDDKMEITASVLRSCTDIFYLIHIIFQFRTGFIAPSSRVFGRGVLVEDARQIAVRYLSS
HFVIDILAVLPLPQVVILIIIPHMRGSRSLNTKNLLKFIVFFQYIPRFIRIYPLYKEVTR
TSGILTETAWAGAAFNLFLYMLASHVFGAFWYLFSIERETVCWKQACNRNRNICDITSLY
CDHRAAGGNAFLNDSCPVQTPNATLFDFGIFLNALQSGVVESQDFPQKFFYCFWWGLQNL
SSLGQNLQTSTYIWEICFAVFISISGLVLFSFLIGNMQTYLQSTTTRLEEMRVKRRDAEQ
WMAHRLLPENLRKRIRRYEQYKWQETRGVDEENLLSNLPKDLRRDIKRHLCLALLMRVPM
FEKMDEQLLDALCDRLQPVLYTEESYIVREGDPVDEMLFIMRGKLLTMTTNGGRTGFFNS
EHLGAGDFCGEELLTWALDPHTSSNLPISTRTVRALVEVEAFALKADDLKFVASQFRRLH
SKQLRHTFRFYSQQWRTWAACFIQAAWRRHVKKKLEESLKEEENRLQDALAKEACGSSPS
LGATMYASRFAANILRTIRRSGSVRKPTRMLQERLPPMLLQKPAEPDFNSDD
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgaatttccgacaagagaagtttgttaggtttcaagactggaagtccgacaagacctcc
gacgcggaatactccggtagaaacgagccaccacaaccaaacggaatcctccggagaacg
ataacctcaatctccgacaagctccacagaagctccgcgagcttcaggagatcctacaag
tcctactctttcaaagaatccctctccagatggatccattcctcccgcaagatcctcgac
cctcagggacccttcctccagaaatggaacaagatcttcgtcctcgcctgcatcatcgcc
gtctctctcgaccctctcttcttctacgtccccgtcgtcgacgacgccaagaagtgcctc
ggcctcgacgacaagatggagataaccgccagcgtcctccgctcctgcacagatatcttc
tacctcatccacatcatctttcagttccgtaccggcttcatcgctccttcctctcgcgtc
ttcgggagaggcgttctcgtcgaggacgcgaggcagatcgctgtgcgttacttgtcctct
catttcgtcatcgatattctcgctgttcttccgcttccgcaggtcgtgattttgattatc
atcccgcatatgagaggctcgaggtctttgaacacgaagaatcttttgaagtttatagtt
ttcttccagtacataccgaggtttatcagaatctatccgctttacaaggaagtgacgaga
acctcagggatacttactgagacagcttgggcaggagctgctttcaatctcttcctctac
atgctcgctagtcatgtgtttggtgctttttggtacttgttctctatcgagcgcgaaact
gtgtgttggaaacaagcttgcaacagaaacaggaacatctgcgacatcacttccttgtac
tgtgaccatagagccgcaggaggcaacgctttcctcaacgattcttgtcctgttcagaca
ccgaacgcaacgcttttcgactttgggatattccttaacgctcttcagtcgggtgtggtt
gagtctcaagatttccctcagaagttcttttactgcttctggtggggtcttcaaaacctc
agttcgctcggtcaaaaccttcaaacaagtacatacatatgggagatttgtttcgctgtc
ttcatttctatctcaggactggttctgttctcgttcttgattggtaacatgcagacgtat
ctgcaatcgacaaccacaagattggaggagatgagagtcaagagaagagacgctgagcag
tggatggctcaccgtttactccccgagaatcttcggaaaagaatcaggcgctacgagcag
tacaagtggcaagagactagaggcgttgacgaagagaatcttcttagcaatctccctaaa
gaccttagacgcgacatcaaacgccacctctgtctcgcccttctcatgcgagttcctatg
ttcgagaaaatggacgagcagctcctcgacgcgctatgcgaccgtttgcaaccagtgctg
tacacagaggaaagctacatcgtgagagaaggagaccccgtggacgagatgctcttcata
atgcgcgggaagctcctgacgatgacgacaaacggtggaagaacaggtttcttcaactca
gagcatctcggcgcaggcgatttctgcggcgaggagcttctgacatgggccttagacccg
cacacatcctcgaacctcccgatctcgacgagaaccgtccgagctctcgtcgaggtcgaa
gcattcgcgctcaaagccgacgacctcaagttcgtggcttctcagttcaggcgtctccac
agcaaacagctgaggcacactttcaggttctactcgcagcagtggaggacttgggcggct
tgtttcatacaagccgcgtggaggcgacacgtgaagaagaagctggaggagtctctcaaa
gaagaagagaacaggttgcaggacgctctggctaaggaggcttgtggaagctcgccgagc
ctcggcgcgactatgtacgcgtcgaggttcgctgctaatatattgcggactatacgtagg
agcgggtcggtgaggaaacctacgaggatgctgcaggaacgtttgccgcctatgctgctt
cagaaaccagcagaaccagatttcaatagtgatgattga
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