Raphanus sativus (radish): 108842803
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Entry
108842803 CDS
T06014
Name
(RefSeq) crossover junction endonuclease MUS81-like isoform X3
KO
K08991
crossover junction endonuclease MUS81 [EC:3.1.22.-]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03440
Homologous recombination
rsz03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
108842803
03460 Fanconi anemia pathway
108842803
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rsz03400
]
108842803
DNA repair and recombination proteins [BR:
rsz03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
108842803
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WHD_MUS81
EarA
DUF4364
CUX1_N
HHH_8
Motif
Other DBs
NCBI-GeneID:
108842803
NCBI-ProteinID:
XP_018471333
UniProt:
A0A6J0MHD6
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Position
2:39998039..40000771
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AA seq
331 aa
AA seq
DB search
MDDERRVVCRENQCLVDYLLQKKREQVDKPEGLSVNMERTFVKAYRNVCDSKDPISTLKD
LFHIKGFGKWMLTLMKGYFDNGTASSGNVQKAKERKRYIPQRNSAAYGLLITLHRGTQNV
KDFMRKQDLIDATDASGLSHASIAPEKGKGKIGLGLSKREYYSGWSCMTTLIHKGLVIKY
SNPAKYKLTVQGREVADECIMRSGLSINDEIDIAQTHAHVRSKADSSAGTSRAQTCEVDI
LTDDEMDIAQPYTHPKSKEHFSAGTSRAQTCHVDLERSRFKKFRSSSDGYTLTPRSSSSS
HAFKDCSSSVCNPFAFTRLLAVWCDLDQAQT
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atggatgatgagagaagggtagtgtgtcgagaaaaccaatgtttagtagattacttgtta
cagaagaagcgagaacaggtagataagcccgagggcttgtcggtaaatatggagaggaca
tttgttaaggcgtatagaaatgtctgcgactccaaagatcccattagcacactcaaagac
ttgtttcatatcaagggcttcggaaagtggatgcttacgctcatgaaaggatactttgat
aatggaactgcaagttccggtaatgtgcaaaaggccaaggagagaaaacgttacattccc
caaagaaactctgctgcttatggattactaataacactgcacagagggactcagaatgtg
aaagatttcatgcgtaaacaagaccttattgatgctactgacgcaagtgggctctcgcac
gcttctatcgcgccagagaaaggaaaagggaaaataggtcttggcctctctaagagagag
tattatagtggatggagctgcatgacgacgcttatacataagggattagtgattaaatat
agcaacccagcaaagtacaagctgacagtccaaggtcgagaagtagcagatgaatgtatt
atgcgatctggattgtccattaatgatgaaatagatattgcacaaacacatgcccatgta
agatccaaggcagattcttcagcaggaacttcaagagcacaaacttgtgaagttgacatc
ttaaccgatgatgaaatggatattgcacagccatatactcatccaaaatccaaggaacat
ttttcagcaggaacttcaagagcacaaacttgtcacgttgatcttgagaggtctcgtttt
aagaaatttcgctcttccagtgatggatacaccttaactccacgttcatccagttctagt
catgccttcaaagactgctcatcttctgtatgtaacccatttgcgttcactagattgtta
gctgtatggtgtgatcttgatcaggctcaaacttaa
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