Raphanus sativus (radish): 108842875
Help
Entry
108842875 CDS
T06014
Name
(RefSeq) DNA repair protein RAD4 isoform X1
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
108842875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rsz03400
]
108842875
DNA repair and recombination proteins [BR:
rsz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
108842875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
Transglut_core
Motif
Other DBs
NCBI-GeneID:
108842875
NCBI-ProteinID:
XP_056858922
UniProt:
A0A9W3D518
LinkDB
All DBs
Position
2:28640373..28644575
Genome browser
AA seq
856 aa
AA seq
DB search
MKPLIKSKDSKLSAASRAAVNKVLDRINARGNKKGDATPQNSDSAKLDKGKKTVTDNVLE
DRECVQFDDDDEMNDSDWEDCPIPTLAKSVDDTYVDDTRELTIELDDLPPDTKRQKKNTY
RATAQDKERAELVHKVHLLCLLARGRIVDNACNDPLIQASLLSLLPSYLTKVSNLEKVTV
RDIAPLLRWVRGNFAVRCTPSSEKSFRTSLAFALESRRGTPEELGALAVALLRALKLTTR
FVSILDVASLKPGAEKDESSGQNRAKTKRGVFRNFTLMVPKHQAISSHPNKSSSHVEDKS
LCETSSESQQEGSAQLQDNKVNSSCEAGTSSKSDGARRKGDVEFEMQLAMAMAATASVNN
QQSSKVTEKKKSPQTTRRSDGLSVSDQVMSTAIGSKKADSPLCWAEVYCNGENMDGRWVH
VDAVNGTIDAEQNVEAAAAACRMLVRYVVAFAGGGAKDVTRRYCTKWHTISSKRVSSSWW
DMVLAPLRELEAAASVIPLANNACSSSSSSSFGMRSAVEDIELATRALTEPLPTNQQAYK
GHELYAIEKWLHKNQILHPKGPVLGFCAGHSVYPRTCVQTLRTKESWLRDGLQLKASEVP
LKILKRNAKIRKGKDFGDGNKDSEDGSSRCMELYGRWQMEPLCLPHAVNGIVPKNERGQV
DVWSEKCLPPGTVHLRFPRIFSIAKRFGIDYAPAMVGFEYKSGRATPVFEGIVVCTEFKD
AILEAYAEEREMREEEERRRNEAQAASRWYQLLSSILTRERLNNRYANNSEDDVVKTRSM
ETKPETVVREENVKTPEKQGGVKRGRKRRSEDDNREGGDGDEHEHVFLDEQETFDEKTSV
KTKRCKCGFSVQVEQM
NT seq
2571 nt
NT seq
+upstream
nt +downstream
nt
atgaagcctcttataaaaagtaaggatagtaagctctcagcagcctcgagagcagctgtg
aataaagttctagacagaatcaatgctcgtggcaacaagaagggagatgctactccacag
aactctgattccgctaagctggacaaggggaagaaaaccgtaactgacaacgttctagag
gacagggaatgtgttcagtttgatgatgatgatgagatgaatgattcagactgggaagac
tgtcctattcctactcttgccaaatctgttgatgatacctacgttgatgacaccagagag
ttaaccattgaacttgatgatttgcctcctgatactaagaggcagaagaagaacacttac
cgtgcaacagcacaagacaaggaacgggcggaacttgtacacaaagttcacttgctctgt
ctgcttgcaagagggaggatagttgacaacgcttgtaatgatcccttgattcaggcttcc
ttgctttcacttctgccatcatacttgacaaaagtatcgaatctagagaaagtgactgtt
agggatatagcccctcttcttcgttgggttcgtgggaactttgctgttaggtgtacaccc
agttctgagaaatcttttcgtacgtctctagcatttgctcttgaatctcgtagaggcacg
cctgaagagcttggagcgttggccgttgctttacttagagcattaaagcttacaactcgg
tttgtgtctattcttgatgttgcctccttaaagcctggggccgaaaaggatgaatcttca
ggtcagaacagagctaaaacgaagcgtggggtattcaggaacttcactcttatggtacca
aagcatcaagccatctcgtcacacccaaacaaatcctcttcccatgttgaggataaaagt
ctctgtgaaacctcttctgagtctcagcaggagggttctgctcagctgcaagacaataag
gtcaactcatcctgtgaagcaggaacgtccagcaaatctgacggagcaaggaggaaaggt
gatgttgagtttgagatgcagttagccatggctatggctgcgactgcgagtgtaaacaac
caacagagttctaaagtaaccgagaaaaagaaaagtccacaaacaacaagaagaagtgat
ggcttgtcagtttctgaccaagtaatgtccacagctatcggttctaagaaagcggattct
cctctttgttgggctgaggtgtattgcaatggagaaaacatggatgggagatgggttcat
gtagatgctgttaatggaacgatagatgctgaacaaaacgtagaagctgcagctgctgct
tgcagaatgttagttagatatgttgtcgccttcgctggtggtggagctaaagatgtcact
cgcaggtactgtacaaagtggcacacgatttcatccaaacgggtgagttcatcgtggtgg
gatatggtcttagcaccgttacgagaactagaggcagccgcaagcgttatccctcttgct
aacaatgcttgctcaagtagtagtagctcgtcctttggtatgaggagtgctgttgaagat
attgagttagctactagggcacttactgagcctcttcccacaaaccagcaggcctataaa
ggtcacgaactctatgctattgagaaatggcttcacaagaaccagatacttcacccaaaa
ggtccggttctggggttctgcgctggtcattccgtttatcctcgaacttgtgtgcagact
cttagaactaaagaaagttggctacgtgatgggcttcaacttaaggccagtgaagttccc
ttaaagattcttaagcgtaacgcaaagatcagaaaaggaaaagattttggagatgggaac
aaggacagtgaagatggttcttctcggtgcatggaactatacgggaggtggcaaatggaa
ccattgtgtctccctcatgctgttaatgggattgtgcctaagaacgagcgtggtcaagtt
gatgtctggtctgagaaatgtctcccacctggaacagtccacttaaggtttcctcgaata
ttttcaattgctaagagatttggaatagattatgcacctgcaatggttggtttcgagtac
aaaagtggacgtgctactcctgttttcgaaggtattgtggtctgcaccgagttcaaagat
gcaatcctcgaggcatatgcagaagaacgagaaatgagagaagaggaggagagaagacga
aacgaagcacaagcagcttcgagatggtatcagcttctttcctctatcttaacccgtgag
aggctgaataaccgttacgccaataactcagaggatgatgttgtcaagacgaggagtatg
gaaacgaaaccagagacggttgttagggaggagaatgtgaaaacacctgaaaagcaagga
ggggttaagagaggaagaaagcgtcgtagtgaagatgacaaccgtgaaggtggagatgga
gatgaacatgagcatgtgtttcttgacgagcaagaaacgtttgatgagaaaacctctgta
aaaaccaaacgctgcaaatgtggcttttctgtccaagttgaacaaatgtga
DBGET
integrated database retrieval system
