Raphanus sativus (radish): 108843017
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Entry
108843017 CDS
T06014
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin ligase PARAQUAT TOLERANCE 3
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rsz04121
]
108843017
Enzymes [BR:
rsz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108843017
Ubiquitin system [BR:
rsz04121
]
Ubiquitin ligases (E3)
U-box type E3
108843017
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DWNN
zf-CCHC_2
U-box
zf-CCHC
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
108843017
NCBI-ProteinID:
XP_056859019
UniProt:
A0A9W3D5P5
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Position
2:30294044..30299605
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AA seq
863 aa
AA seq
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MAIYYKFKSAKAYDTISMDGPFISVGFLKEKIYETKHLGSGKDLDIVISNAQTNEEYLDE
AMLIPKNTSVLIRRVPGRPRIRVINQQEPRVEEKVETVQADMSNLVTADTSVAEDEFDEF
GNDFYSVPAAPAVNYNSNPCPDPLAPADEKVDEETKLKALIDTPALDWQQQGADGYGSGR
GYGRGMPGRNGGRGFGNGMERKTTPPPGYICHRCNVPGHFIQHCPTNGDPTYDVKRVKPP
TGIPKSMLVATPDGSYSLPSGAVAVLKPNEDAFEKEMEGLRSVTRSVGEIPPELKCPLCK
EVMRDAALTSKCCYQSFCDKCIRDHIIAKSMCVCGDTNVLADDILPNKTLRDAINRIMES
GNSSAENAGSMCQVQDMESARCLPPKVLSPTTSAASKGEKRPAPSHNIETLPLKPPVEVA
EITSAPKVAEEIVKVDKPVDASESLNGKEAVVSQVNTQAPKEETQQQVASGDQGKXLEKK
KKKKPRMPGPDMQWNPMQHPAGPDYMMPPPMGPGPSNHFFNGMQPGFNGFQPGFNGFHPG
FNGFAGPYPGGMPPYVGYGLGPMDMYGGMLHPDPFAAAQGFGFPNIPPPHRDLAEMGNRM
NVQRPMMPGREEFEARKAEMKRKRENERRSQGGNGMREGEKSRMMNNNNNSADSSSPMKP
KSGHGPPPPIPDYDRRRRSERSSSERQSSRQRVSSPSRVSSKKSEHDDRSREHRRDDDRS
RERRRDDDQSRERHRDSDRKHRKRSEMPSSETPTSEFADNHKSGVFSRISFPEEASSGKQ
RKTSKSSPAPPETSTASAAVSSTRRHSGRERESAEYESSDDEDRHFKRKPSRYHERSPSV
PDSDVGDEHFRRSKRSKGERWRA
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atggcaatttattacaagtttaagagtgccaaggcttatgataccatctccatggatggt
ccttttatatcagttggttttctcaaagagaaaatttacgaaactaagcatttgggcagt
ggtaaagaccttgacattgtcatctctaatgcccaaactaacgaagaatatctagatgaa
gcaatgttaatccccaaaaatacttctgtcctaattcgccgggtccctggacgccctcgc
atcagagttatcaaccaacaagagccgagagtggaggagaaagtcgaaactgttcaggct
gatatgagtaatcttgttactgctgatacatctgttgctgaagatgagtttgacgagttt
gggaatgatttttattcagttcctgctgccccagctgtcaattataatagtaacccatgt
cctgatcctcttgcaccagccgatgagaaagtagatgaagaaaccaaacttaaggcgttg
atagacactccggcattagactggcagcaacaaggcgcagatgggtatggctcgggaaga
ggttacggtaggggtatgcctggaaggaatggtggacgcggttttggtaatggaatggag
aggaaaacgacgccgccaccaggatatatatgccatcgttgcaatgttcctggacatttt
attcagcactgccctacaaatggcgatcctacctatgatgttaagagagttaaaccacct
actggtattccaaagtctatgctagtggcgaccccagatggctcttattccttgccaagt
ggcgctgttgcagttttgaaaccgaatgaggatgcgtttgagaaggaaatggaggggttg
cggtcagtaacacgctctgtcggggagattcctcctgaactgaaatgccccttatgtaaa
gaagtgatgagagatgctgccctgacgagtaaatgctgttaccagagcttctgtgacaag
tgtatcagagatcacataattgcaaagtcaatgtgtgtttgtggagacaccaatgtacta
gctgatgatattctaccaaacaagaccctcagggatgctataaaccgtatcatggagtct
ggtaacagtagtgctgagaacgctggcagcatgtgccaagtccaagatatggagtctgca
cgatgtctacctccaaaggttctctctcctactacatctgctgcatctaaaggggaaaag
agaccagctcctagtcacaacattgagactttacctctaaagccgccagtagaagtagcg
gagatcacaagtgctcctaaggtggctgaagaaatagttaaagtggataagccggttgat
gcatccgaaagcttgaatggcaaggaagcggtggtttcgcaggtgaatacgcaagctccc
aaggaagaaacacagcagcaggttgcttccggggatcaaggtaagtaactggaaaaaaag
aagaaaaagaaacctcggatgcctggacctgatatgcaatggaatcccatgcagcatcca
gcaggccccgactacatgatgccgccaccaatgggtccaggtcccagtaatcatttcttc
aatggtatgcaaccagggttcaacggctttcaaccagggttcaatggctttcatcctggt
ttcaatggctttgctggcccttatcctggcgggatgcctccttatgttggttatggttta
ggccccatggacatgtatgggggtatgttacatccagatccttttgctgcggcgcagggc
tttgggttccctaacataccaccacctcatagggaccttgcggagatggggaatcgtatg
aacgtccaacgtcctatgatgccggggagagaggaattcgaagctaggaaagctgagatg
aaaagaaaacgtgaaaacgagagacggtcacaaggagggaatggcatgagggaaggtgag
aagagcagaatgatgaacaacaacaacaactcggcagactcttcctcacccatgaagcca
aaatctggacatggacctccgccacctatccctgattacgaccgtcgtagacgatcggaa
agatcatcatcagagcgtcagtcatcgcggcagagggtcagctctccctctcgagtatcc
agcaagaaatctgagcatgatgatcgaagccgggaacaccgccgtgatgatgatcgaagc
cgggaacgccgccgtgatgatgatcaaagccgggaacgccaccgagattctgatcgcaag
caccgtaagagatccgagatgccatcgtcggagacaccaacttcagagttcgctgataac
cacaagtccggcgtgttctcgaggataagctttccggaggaggcatcttcaggcaagcaa
cgtaagacgtcaaagtcttctccagcgccgccagagacctcgacggcctcggcagccgtt
tcatcgactcgtcgtcatagcgggagggaaagagagtcggcagaatacgagtccagtgat
gatgaagacaggcatttcaagaggaagccgtcaaggtaccacgagcggtctccgtcggtg
ccggattctgacgtcggtgacgagcatttccgacgttcgaagcgatcgaaaggagaaaga
tggcgggcttga
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