KEGG   Raphanus sativus (radish): 108843073
Entry
108843073         CDS       T06014                                 
Name
(RefSeq) protein RAE1-like isoform X1
  KO
K14298  mRNA export factor
Organism
rsz  Raphanus sativus (radish)
Pathway
rsz03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    108843073
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rsz03019]
    108843073
   03036 Chromosome and associated proteins [BR:rsz03036]
    108843073
Messenger RNA biogenesis [BR:rsz03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     108843073
Chromosome and associated proteins [BR:rsz03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    108843073
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_WDHD1_1st Beta-prop_EML_2 WDR55 WD40_CDC20-Fz Beta-prop_RIG_2nd Beta-prop_TEP1_2nd Beta-prop_EML EIF3I WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_TEP1_C Beta-prop_HPS5 Beta-prop_SPT8 Beta-prop_WDR19_1st Beta-prop_WDR75_1st Beta-prop_Nup120_160 Beta-prop_IFT122_1st Beta-prop_BBS7 GH18_BT1044-like
Other DBs
NCBI-GeneID: 108843073
NCBI-ProteinID: XP_018471663
UniProt: A0A6J0MIC2
LinkDB
Position
2:234110..236332
AA seq 346 aa
MATFGATANTNPNKSFEVTPSPADSISSLTFSPRADILVATSWDNQVRCWEISRSGNNLA
SAPKASISHDQPVLCSAWKDDGTAVFSGGCDKQAKMWPLLSGGQPVTVAMHDAPIVDMGW
IPGMNLLVTGSWDKTLRYWDTRQQTPVHTQQLPDKCYSLSVKHPLMVVATADRNLIVYNL
QNPQTEFKRVVSPLKYQTRCVTAFPDQQGFLVGSIEGRVGVHHLDDSQQNKNFTFKCHRD
GNEIYSVNSLNFHPVQGTFATAGSDGAFNFWDKDSKQRLKAMSRCSQPITCSSFNHDGSI
FAYASCYDWSKGAENHNPATAKSSIFLHMPQESEVKAKPRVATGRK
NT seq 1041 nt   +upstreamnt  +downstreamnt
atggctaccttcggtgcgacggctaatactaatcccaacaaatcctttgaggttactccg
tcaccagcagattcaatcagcagcttgacctttagccccagagccgatatccttgtcgcc
acttcttgggacaatcaggtgaggtgttgggagatatcccgtagtgggaacaatctagca
agtgctcctaaagcatccatatcccatgatcagcccgtcttgtgttccgcttggaaagat
gatggaaccgctgtctttagtggtggttgtgataagcaagccaaaatgtggcccttgttg
tctggtggtcaacctgttactgttgctatgcacgatgctcctattgttgacatgggctgg
atccctgggatgaatctcctcgttactggaagctgggataagactttgaggtattgggat
acaaggcagcaaacacctgtgcatacccaacagcttccagataaatgctattctttgtct
gtgaaacaccctctcatggttgtcgcaactgctgataggaatctcattgtctacaacttg
caaaatcctcagactgagttcaagagagtggtgtccccactcaagtaccagacgaggtgt
gttactgccttccctgatcagcaaggatttttggttggttcaattgaggggcgggttggt
gtgcatcatctggatgattctcaacagaacaagaacttcacattcaaatgccacagagat
gggaatgagatctattctgtcaactctctcaacttccacccggtacaaggaacttttgct
actgctggctcagatggggctttcaatttctgggacaaggatagcaaacaaagactcaag
gcaatgtcaaggtgcagtcagccaattacttgcagttcgtttaaccacgatgggtcgata
tttgcatatgcgtcgtgctatgactggagcaaaggtgcagagaatcacaacccggcaact
gctaaaagcagcatcttcttgcacatgcctcaggaaagtgaggtcaaggcgaagccaaga
gtagcaaccggcagaaaatga

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