Raphanus sativus (radish): 108843073
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Entry
108843073 CDS
T06014
Name
(RefSeq) protein RAE1-like isoform X1
KO
K14298
mRNA export factor
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108843073
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsz03019
]
108843073
03036 Chromosome and associated proteins [BR:
rsz03036
]
108843073
Messenger RNA biogenesis [BR:
rsz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
108843073
Chromosome and associated proteins [BR:
rsz03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
108843073
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
WD40_CDC20-Fz
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_HPS5
Beta-prop_SPT8
Beta-prop_WDR19_1st
Beta-prop_WDR75_1st
Beta-prop_Nup120_160
Beta-prop_IFT122_1st
Beta-prop_BBS7
GH18_BT1044-like
Motif
Other DBs
NCBI-GeneID:
108843073
NCBI-ProteinID:
XP_018471663
UniProt:
A0A6J0MIC2
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Position
2:234110..236332
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AA seq
346 aa
AA seq
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MATFGATANTNPNKSFEVTPSPADSISSLTFSPRADILVATSWDNQVRCWEISRSGNNLA
SAPKASISHDQPVLCSAWKDDGTAVFSGGCDKQAKMWPLLSGGQPVTVAMHDAPIVDMGW
IPGMNLLVTGSWDKTLRYWDTRQQTPVHTQQLPDKCYSLSVKHPLMVVATADRNLIVYNL
QNPQTEFKRVVSPLKYQTRCVTAFPDQQGFLVGSIEGRVGVHHLDDSQQNKNFTFKCHRD
GNEIYSVNSLNFHPVQGTFATAGSDGAFNFWDKDSKQRLKAMSRCSQPITCSSFNHDGSI
FAYASCYDWSKGAENHNPATAKSSIFLHMPQESEVKAKPRVATGRK
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atggctaccttcggtgcgacggctaatactaatcccaacaaatcctttgaggttactccg
tcaccagcagattcaatcagcagcttgacctttagccccagagccgatatccttgtcgcc
acttcttgggacaatcaggtgaggtgttgggagatatcccgtagtgggaacaatctagca
agtgctcctaaagcatccatatcccatgatcagcccgtcttgtgttccgcttggaaagat
gatggaaccgctgtctttagtggtggttgtgataagcaagccaaaatgtggcccttgttg
tctggtggtcaacctgttactgttgctatgcacgatgctcctattgttgacatgggctgg
atccctgggatgaatctcctcgttactggaagctgggataagactttgaggtattgggat
acaaggcagcaaacacctgtgcatacccaacagcttccagataaatgctattctttgtct
gtgaaacaccctctcatggttgtcgcaactgctgataggaatctcattgtctacaacttg
caaaatcctcagactgagttcaagagagtggtgtccccactcaagtaccagacgaggtgt
gttactgccttccctgatcagcaaggatttttggttggttcaattgaggggcgggttggt
gtgcatcatctggatgattctcaacagaacaagaacttcacattcaaatgccacagagat
gggaatgagatctattctgtcaactctctcaacttccacccggtacaaggaacttttgct
actgctggctcagatggggctttcaatttctgggacaaggatagcaaacaaagactcaag
gcaatgtcaaggtgcagtcagccaattacttgcagttcgtttaaccacgatgggtcgata
tttgcatatgcgtcgtgctatgactggagcaaaggtgcagagaatcacaacccggcaact
gctaaaagcagcatcttcttgcacatgcctcaggaaagtgaggtcaaggcgaagccaaga
gtagcaaccggcagaaaatga
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