Raphanus sativus (radish): 108843165
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Entry
108843165 CDS
T06014
Name
(RefSeq) ruvB-like protein 1
KO
K04499
RuvB-like protein 1 [EC:
5.6.2.4
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
108843165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rsz03036
]
108843165
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
rsz03037
]
108843165
Enzymes [BR:
rsz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
108843165
Chromosome and associated proteins [BR:
rsz03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
108843165
Chromatin remodeling factors
SRCAP complex
108843165
INO80 complex
108843165
INO80 complex (yeast)
108843165
SWR1 complex
108843165
ASTRA complex
108843165
Cilium and associated proteins [BR:
rsz03037
]
Motile cilia and associated proteins
Dynein assembly factors
108843165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TIP49
TIP49_C
AAA
RuvB_N
AAA_22
AAA_19
AAA_5
AAA_16
AAA_18
Mg_chelatase
bpMoxR
AAA_25
TsaE
Cdc6_lid
GvpD_P-loop
DnaB_C
AAA_7
nSTAND3
Zeta_toxin
AAA_11
AAA_28
NPHP3_N
IstB_IS21
Rad17
Motif
Other DBs
NCBI-GeneID:
108843165
NCBI-ProteinID:
XP_018471784
UniProt:
A0A6J0MI26
LinkDB
All DBs
Position
2:complement(20198967..20202158)
Genome browser
AA seq
458 aa
AA seq
DB search
MEKVKIEEIQSTAKKQRIATHTHIKGLGLEPTGIPIPLAAGFVGQLEAREAAGLVVDMIK
QKKMAGKALLLAGPPGTGKTALALGISQELGSKVPFCPMVGSEVYSSEVKKTEVLMENFR
RAIGLRIKETKDVYEGEVTELSPEETESLTGGYGKSISHVIIGLKTVKGTKQLKLDPTIY
DALIKEKVAVGDVIYIEANSGAVKRVGRSDAFATEFDLEAEEYVPLPKGEVHKKKEIVQD
VTLQDLDAANARPQGGQDILSLMGQMMKPRKTEITDKLRQEINKVVNRYIDEGVAELVPG
VLFIDEVHMLDMECFSYLNRALESSLSPIVIFATNRGVCNVRGTDMPSPHGVPIDLLDRL
VIIRTQIYNPSEMIQIIAIRAQVEELTVDEECLVLLGDIGQRTSLRHAVQLLSPASIVAK
MSGRDNICKADIEEVTSLYLDAKSSAKLLHEQQEKYIS
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggagaaagtaaagattgaagaaatacagtccaccgctaagaaacagcggattgctact
cacactcatatcaaaggcctcggcctcgagccaaccgggattcctataccattggcggct
ggatttgtcggtcaactcgaggctagagaggcagctggtcttgttgtcgacatgatcaaa
cagaagaaaatggctggcaaggctcttttgctcgctggacctcccggaaccgggaaaact
gctttggctcttggaatatcccaagagctgggaagtaaggttcccttttgtccaatggtt
ggatctgaggtttactcatcagaggttaagaaaactgaggttctcatggagaattttaga
cgtgccattggcctacgtatcaaggaaaccaaagacgtctacgaaggagaggttacggag
ctgtccccagaagagactgaaagtcttactggaggttatggcaaaagcatcagtcatgtt
atcattggactcaagacagtcaaaggaaccaaacaacttaagttggatcccactatctac
gatgccttgattaaggaaaaagtagctgtgggggatgttatatacattgaagcaaacagt
ggagctgtcaagcgggtgggtagaagtgatgcttttgccactgagttcgacctggaagca
gaagaatatgttccacttcccaagggagaggttcacaaaaagaaagagattgtgcaggat
gtgacgcttcaagatctggatgcagcaaatgctcgacctcaaggtgggcaggatatactt
tctttgatgggccaaatgatgaaaccccggaagactgagatcactgataagctgcgccaa
gaaattaacaaggttgttaaccgttatatagatgaaggtgttgcagaactcgttcccgga
gttctatttatcgatgaggttcatatgcttgatatggagtgcttttcttacttaaaccgt
gcgctggagagctctttatctccaatagtgatatttgcaacaaatagaggagtctgcaac
gttagagggactgatatgcctagtccacatggagtccctatcgacttgttggatcggttg
gtgattatcaggactcaaatctataatccctctgaaatgatacagattatagccattcgt
gcgcaagtagaagagctaacggtggatgaagaatgcttggtcctacttggggacattggg
caaagaacatctctaagacacgctgttcagctgttgtctcctgccagcatcgtggcgaaa
atgagtggacgtgacaatatctgcaaggctgatatagaggaagtaacatcactctacctt
gatgccaaatcttcagcaaagcttttacacgagcaacaagaaaaatacatctcatga
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