Raphanus sativus (radish): 108843189
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Entry
108843189 CDS
T06014
Name
(RefSeq) chloride channel protein CLC-c
KO
K05016
chloride channel 7
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rsz01009
]
108843189
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rsz04131
]
108843189
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rsz04040
]
108843189
Protein phosphatases and associated proteins [BR:
rsz01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
108843189
Membrane trafficking [BR:
rsz04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
108843189
Ion channels [BR:
rsz04040
]
Chloride channels
Chloride channel (CLC)
108843189
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Voltage_CLC
CBS
TAT_signal
Motif
Other DBs
NCBI-GeneID:
108843189
NCBI-ProteinID:
XP_018471818
UniProt:
A0A6J0MIT7
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Position
2:complement(8828989..8832716)
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AA seq
775 aa
AA seq
DB search
MDDRIDDHDIEVEGGLHAYDRKISGLLDDGSVGFQQPLLARNRKNTTSQIAIVGANTCPI
ESLDYEIFENDLFKQDWRSRKKIEILQYTILKWALAFLIGLATGLVGFLNNLAVENIAGF
KLLLTGNLMLKEKYFQAFFAFAGCNLILATVAASLCAFIAPAAAGSGIPEVKAYLNGIDA
YSILAPSTLFVKIFGSIFGVAAGFVVGKEGPMVHTGACIANLLGQGGSRKYKLTWKWLRF
FKNDRDRRDLITCGAAAGVAAAFRAPVGGVLFALEEAASWWRSALLWRTFFTTAVVAVVL
RSLIELCRSGKCGLFGKGGLIMFDVNSGPVLYSTPDLLAVVFLGVVGGVLGSLYNYLVDI
VLRTYALINERGPGFKVMLVMAVSILSSCCAFGLPWLSQCTPCPIGSEGKCPSVGHSGIY
KSFQCPPNHYNDLSSLLLNTNDDAIRSLFTSRSENEFQISTLAMFFVFVFCLGIITYGIA
IPSGLFIPVILAGASYGRLVGRLLGPVSQLDVGLFSLLGAASFLGGTMRMTVSLCVILLE
LTNNLLMLPLVMLVLLISKTVADCFNKGVYDQIVTMKGLPYMEDHAEPYMRNLVAKDVVA
GPLLSFSRVEKVGVIWQALRMTAHNGFPVIDEPPFTEASELCGIALRSHLLVLLQGKRFS
KQKTTFGSQILRSCKARDYAKAGLGKGLKIEDLVISDEEMEMYVDLHPITNTSPYTVLET
LSLAKAAILFRQLGLRHLCVVPKTPGRPPIVGILTRHDFMPEHVLGLYPHIDPLK
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atggatgatcgtatcgacgaccacgatatagaggtggaaggaggtctccacgcgtatgac
aggaagatatctgggcttctagatgatggatctgtcggattccaacagcctctgctcgca
aggaaccgaaagaacaccacttcccagatcgctattgtcggagccaatacttgtcccatc
gaaagccttgactacgagatctttgagaatgatctattcaagcaggactggaggtctagg
aagaagattgagatacttcagtacaccattctcaaatgggcccttgctttcctcatcggt
ttagccactggcctcgttggctttttgaataaccttgctgttgagaatatagctggattc
aaactcttgctcaccggtaacctcatgctcaaggaaaaatactttcaggccttctttgcg
ttcgctggttgtaacttgattttggcaactgttgctgcttctctctgtgctttcattgct
ccggcagcagcaggatctgggatacctgaggttaaagcatatctcaatggtatagatgct
tattcaatattagctccgagcaccctcttcgttaagatctttggctctatatttggagta
gctgcgggattcgtagtcggaaaagaagggcctatggtgcatactggtgcttgcattgct
aatttacttggacaaggtggttctagaaagtataaactgacttggaagtggctcaggttc
ttcaaaaacgacagagacagaagagacctcatcacttgcggagctgctgctggtgtggct
gctgctttccgtgctcccgtcggcggagttcttttcgccctcgaagaagctgcttcttgg
tggaggagtgcccttctttggagaaccttcttcactaccgcggttgtagcagtagtgtta
cgaagtctgatcgagctctgccgatctggtaaatgtggactgttcggaaaaggcggtctc
atcatgttcgacgtgaactcgggtccagtgctttacagcacaccggatttgctagcagta
gtgttccttggagttgttggtggtgtccttggtagcctttacaactatctcgtcgacata
gtcctccgcacttacgccttaataaacgagagaggtccgggatttaaagtgatgcttgta
atggcagtttccattttaagctcatgctgtgcgtttggtcttccatggctttcacagtgt
accccttgtcctattggatcagagggaaagtgcccaagcgtaggtcattctgggatctac
aagagtttccagtgtcctccaaaccattacaatgacctttcctccctacttctcaacacc
aacgacgacgctatccgcagtcttttcacgtcaaggtctgagaatgagttccaaatctcc
accctcgctatgttctttgtcttcgtattctgccttggcatcataacgtatggcatagct
ataccctctggtcttttcattcccgttattctcgctggagcttcgtatggacggctggtg
ggcagacttttgggaccggtgtctcagcttgatgtaggtttgttttctctccttggagct
gcttcattccttggaggcacaatgaggatgactgtctctctatgtgtcattctcctcgag
cttacaaacaatctccttatgctgcctctggtgatgcttgtgctcttgatctctaaaacc
gttgctgattgtttcaacaaaggtgtctatgaccagattgtgacaatgaaaggactgcct
tacatggaagaccacgcagagccctacatgcgcaatttggttgcaaaggacgttgttgct
ggacctttgttatccttttcacgagttgagaaggttggggttatatggcaggctttaagg
atgacagctcataatggcttccctgttattgatgagccacctttcaccgaagcttctgag
ctatgtgggatcgccttgagatctcatctccttgtgcttctccaaggaaagagattctcc
aagcagaaaacgacgtttggttctcagattcttagaagctgcaaggctcgtgactatgcc
aaagcagggttagggaaagggctcaagattgaggatttggttataagtgatgaggagatg
gagatgtatgttgatctccatccaatcactaacacatctccttacactgtgcttgagact
ttgtctctagctaaagcagctattcttttccggcaacttggtcttcgccacttgtgtgtg
gtgcccaaaacaccagggagaccgcctattgttgggatacttacaaggcatgatttcatg
ccggaacatgtcctggggctctaccctcacattgatcctctgaagtga
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