Raphanus sativus (radish): 108843228
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Entry
108843228 CDS
T06014
Name
(RefSeq) uncharacterized protein LOC108843228 isoform X2
KO
K14295
nuclear pore complex protein Nup50
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108843228
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsz03019
]
108843228
Messenger RNA biogenesis [BR:
rsz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
108843228
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ran_BP1
Ntox33
DUF4681
Motif
Other DBs
NCBI-GeneID:
108843228
NCBI-ProteinID:
XP_018471868
UniProt:
A0A6J0MIY7
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Position
7:complement(22575886..22578857)
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AA seq
337 aa
AA seq
DB search
MSELSITNFWVQIQLKNHPDELWEDGMNDYISHASNILEQFKDVVDWLKENKVKGDNVSP
EPTRAEKKQVAEVKNNDVTPALNNSLFASNTQPALFSTNRSSNFSSSQSGSFSSQPGVFS
SSPFGLASNSQTGSFSSSQFGLAKSSPPNLFSSSQAGGISNSQPSFSFSNNHNPFSSGVT
PVSIPAKRDSPEDEEGEDEEPQPSSPSVKKTEEKGVTVVHEIKCKLYVKSNDPADKGAWK
DKGTGNLYIKCKEGVDKGTKESKPTILVRNDVGKLLLNALLYTGIKTSAQKNALVAIFHS
SEDSNENVTPRTFLIRTKTAEARDKLATAIQEYAPSS
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagctctcaataaccaatttttgggtgcaaatacagctgaagaatcatcctgat
gaactttgggaagatgggatgaatgactacattagccatgcttccaacattctggaacag
tttaaagatgtcgtcgactggctaaaagaaaataaggtaaagggggataatgtatcccct
gaacctactagagccgagaagaaacaagtggctgaggtcaagaataacgacgttacacca
gctttaaataacagcctctttgcttcaaacactcaacctgcgctcttctcgaccaatcgt
tcttccaattttagcagtagtcagtctggttcgttttcaagccagcctggagttttctcc
agtagtccatttggtttagcatctaatagccaaactggatcttttagtagtagccagttt
ggtttagccaaaagcagcccacctaacttattttccagcagtcaagcaggaggaatctcc
aatagccaaccttctttctcattttctaataatcataatcctttttcatctggagttact
ccagtgtccatacctgcaaagcgagattctccagaagatgaagaaggtgaagatgaagaa
cctcaaccgagcagtccatctgtcaaaaagaccgaagagaagggtgttactgtggttcat
gaaatcaaatgcaaactttatgtcaagtcaaatgacccagcagataaaggtgcatggaaa
gataaaggaactgggaatctctacataaaatgcaaagaaggcgtcgacaaggggacaaaa
gaatctaaacccacaattcttgtccgaaacgatgtcgggaagctgcttcttaatgctcta
ctgtacactggaatcaagacgagtgcgcagaagaacgcacttgttgcaatatttcactcc
tcggaggattccaacgagaatgtaacacctagaacctttctgataaggacaaagacagca
gaggctagggataagttagcaacagccatccaagaatacgcaccttcttcataa
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