Raphanus sativus (radish): 108843269
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Entry
108843269 CDS
T06014
Name
(RefSeq) arginine--tRNA ligase, cytoplasmic isoform X1
KO
K01887
arginyl-tRNA synthetase [EC:
6.1.1.19
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
108843269
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rsz01007
]
108843269
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rsz03016
]
108843269
03029 Mitochondrial biogenesis [BR:
rsz03029
]
108843269
Enzymes [BR:
rsz01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.19 arginine---tRNA ligase
108843269
Amino acid related enzymes [BR:
rsz01007
]
Aminoacyl-tRNA synthetase
Class I (G)
108843269
Transfer RNA biogenesis [BR:
rsz03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
108843269
Prokaryotic type
Other AARSs
108843269
Mitochondrial biogenesis [BR:
rsz03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
108843269
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1d
DALR_1
Arg_tRNA_synt_N
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
108843269
NCBI-ProteinID:
XP_056854407
UniProt:
A0A9W3CS04
LinkDB
All DBs
Position
Unknown
AA seq
651 aa
AA seq
DB search
MAMRLTLFPVTATPPSSLCSFNLLSRSPHLAYLSSSSSLSGVLRATTRRLAFATRSKSVA
TMAANQEFTGNLKREVEKLFDASLRLTVPDGTSVETEVAASLPGKPGDYQCNNAMGLWSV
IKGKGTQFRGPPAVGQAISKNLPVSEMVETCSVAGPGFVNLVLSSKWMAKSIEKMLIDGI
DTWAPTLPVKRAVVDFSSPNIAKEMHVGHLRSTIIGDTLARMLEYSKVEVLRRNHVGDWG
TQFGMLIEYLFEKFPDTESVTETAIGDLQTFYKASKSKFDSDPDFKEKAQKAVVRLQGGD
PIYRKAWAKICEISRTEFDKVYQRLKVELEEKGESFYNPYIADVIGKLDSKGLIEESEGA
RVIFLEGFNIPLMVVKSDGGFNYASTDLTALWYRLNEEKAEWIVYVTDVGQQQHFNMFFK
AARKAGWLPDSDKTYPRVDHVGFGLVLGDDGKRFRTRSSDVVRLVDLLDEAKTRSKTALI
ERGKDKEWTPEELDQTAEAVGYGAVKYADLKNNRLTNYTFNFDQMLSDKGNTAVYLLYAH
ARICSIIRKSGKDIDELKKTEKLALDHPEERALGLHLLRFAETVEEACSNLLPNVLCHYL
YDLSERYTSFYSIHQVIGSPEEASRLLLCEATAVVMRKCFHLLGITPVYKI
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atggcaatgaggctaacccttttcccggttacagctacaccgccgtcatctctctgttcc
ttcaatcttctttctcgttctcctcacttagcttatctgtcctcttcttcttccctgtct
ggtgtactgagagcgacgactaggagacttgcttttgcgacaagatcaaagtcagtggca
accatggcagctaatcaagagttcacggggaatctaaaacgcgaggtcgagaagctcttt
gatgcttctctgagattaactgttcctgatggaactagtgttgagaccgaggttgctgcc
tctcttcctggaaaacctggagattaccaatgtaacaatgcaatgggtctatggtccgtt
attaaaggaaagggcactcagttcaggggtcctccagctgttggacaggccatttcgaag
aatctacctgtttcagagatggttgaaacttgctctgtagctggccctggttttgttaat
cttgtactatcaagcaagtggatggctaagagtattgaaaaaatgctcatcgacgggatt
gacacatgggcgcctacccttccagttaagagagccgtggttgatttttcctctcccaac
attgctaaagagatgcatgttggtcacctgagatcaaccatcatcggtgacactctagct
cgcatgctcgagtactcaaaggttgaagttctacgcagaaaccatgttggtgactgggga
acacagtttggcatgctaattgagtatctctttgagaaatttcctgatactgagagtgtg
actgagacagccattggagatcttcagacgttttacaaagcatcaaagagtaaatttgat
agtgatccagacttcaaggaaaaagcacaaaaggctgtggtccgtctacagggtggagat
cctatttaccgcaaggcttgggctaagatttgtgaaatcagccgaaccgaatttgacaag
gtttatcagcgccttaaagttgagcttgaagagaagggtgaaagcttttacaacccctac
atcgctgacgtaatcgggaagttggatagcaaggggttgattgaagaaagtgagggtgct
cgtgtgattttcctcgaaggcttcaacatccccctcatggttgtaaagagtgacggtggt
tttaactatgcctcaactgatctgactgctctttggtatcggcttaatgaagagaaagct
gagtggattgtatatgttaccgatgttggccagcagcaacattttaacatgttcttcaaa
gctgcaagaaaagctggttggcttccagacagtgataaaacttaccctagagttgaccat
gttggatttggtctcgtccttggggacgatggcaagcgatttagaacgcgatcttcagat
gtagtccgcctagttgatttgctagatgaggccaagactcgcagtaaaactgcccttatt
gagcgtggtaaggacaaagaatggactcccgaggagctagaccaaacagctgaggcagtt
ggatatggtgcggtgaagtatgctgatctgaagaacaacagattgacaaattatactttc
aactttgatcaaatgcttagtgacaagggaaatacagccgtttaccttctttacgctcat
gctcggatctgttcaatcatcagaaaatctggcaaggacatagatgagctgaaaaagaca
gaaaagctagcattggatcatcctgaagaacgagcactagggcttcacttgcttcgattt
gctgagacggttgaggaagcttgcagcaacttgttgccgaacgtgctgtgtcactacctc
tacgacttatctgaacgctacacctccttctactccattcatcaggtcattggttcacca
gaagaggcaagccgtctcctactttgtgaagcgacggctgtagtgatgcggaaatgcttc
caccttcttggaatcactcctgtttacaagatttga
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