KEGG   Raphanus sativus (radish): 108843286
Entry
108843286         CDS       T06014                                 
Name
(RefSeq) splicing factor U2af large subunit A-like
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
rsz  Raphanus sativus (radish)
Pathway
rsz03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    108843286
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:rsz03041]
    108843286
Spliceosome [BR:rsz03041]
 Complex A
  U2 snRNP components
   U2 related factors
    108843286
 Complex B
    108843286
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_occluded
Other DBs
NCBI-GeneID: 108843286
NCBI-ProteinID: XP_018471950
UniProt: A0A6J0MIK4
LinkDB
Position
2:complement(37681914..37685108)
AA seq 546 aa
MTDFEDHAGNGAAVDGGEIENQLESKSQEERRDNERECSRSKDREREKSRDKDSDRRSRD
RDVDHKSKERSRDRDGGHHRSSRHRDRSRDRSDRRDDDDDDDHRRSRDRDYDRRRDDRRR
RRSRSRSKDRSRHRRSRSPSKPKRVSGFDMAPPASAMLAAGAATPVTAQVPPAPPTIGMF
PNIMSLPNGQAFGGLPMMPIQAMTQQATRHARRVYVGGLSPQANEQSVATFFSQVMAAVG
GNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMSLDGIIFEGAPVKVRRPSDYNPSL
AASLGPSHPSPHLNLAAVGLTPGASGGLEGPDRIFVGGLPYYFTELQVRELLESFGALKG
FDLVKDRETGNSKGYAFCVYQEVAVTDIACAALNGIKMGDKTLTVRRANQGAMQPKPEQE
SVLMHAQQQIAFQVNMLQPGPVATTVVCLTQVVNEDELRDDEEFEDIMEDMRQEGGKFGA
LTSVVIPRPSPSGEPVAGLGKVFLKYGDTDGSSRARSGMNGRKFGGNQVVAVFYPEDKFE
QGDYGA
NT seq 1641 nt   +upstreamnt  +downstreamnt
atgaccgacttcgaagatcacgcgggaaacggcgcggctgttgatggcggcgaaatcgag
aatcaattagaatcgaaatctcaggaagaaaggcgtgacaatgaaagggagtgttcgaga
agtaaagatagagaaagagagaagagccgtgataaggactccgatcgtcgaagcagagac
agagatgttgatcacaaaagcaaggagaggagtagagacagagatggtggtcatcaccga
agtagtcgtcacagggatcgtagcagggaccgtagtgatagaagagatgatgatgatgat
gatgaccaccgtagaagccgtgaccgtgactatgataggcgtagagatgatagacgtcgc
cgtaggtctcgttctcgttccaaggatagatctcgtcatcgcagatctcgatctccatca
aaaccgaagcgggtgagtggattcgacatggcacctccagcctctgctatgttagctgct
ggtgctgctactcctgttacagcccaagttcctcccgcaccaccaactattggaatgttt
cccaacataatgtccttaccaaatggacaggcgtttgggggactccctatgatgccaatc
caggctatgacacagcaggcgactaggcatgctcgcagagtctatgttggtggcctttcc
cctcaagccaatgaacagtcagtggctactttttttagtcaagttatggctgctgttggt
gggaacactgctggtccaggtgatgctgttgttaatgtttacatcaaccatgagaagaag
tttgcttttgtggagatgcgttctgttgaagaggctagtaacgcaatgtctttggacggg
attatctttgagggagctccagtgaaggtgagaaggcctagtgactataacccatctcta
gctgcatcacttggtccaagccatcccagtccccatctaaacttagctgctgttggtctg
actccaggtgcttccggtgggctcgagggtccagaccgtattttcgtcggcgggcttccg
tactacttcaccgagttgcaagtcagggagctgcttgagagctttggagccctcaagggc
tttgatctcgtgaaagacagagagactggcaactctaaaggatacgctttctgtgtctac
caagaagtcgccgttacagacattgcgtgcgctgccctaaacggcatcaaaatgggagat
aagacacttaccgtgagacgtgccaaccagggagcaatgcagccgaaacctgaacaagag
agtgtattgatgcatgctcaacagcagattgcttttcaggtgaatatgttacagccaggc
ccagtggcaacaacggttgtgtgtttgactcaagttgttaatgaggatgagcttagagac
gacgaggagtttgaagatatcatggaagacatgagacaagaaggcggaaagtttggtgct
ttgaccagcgttgtgattccgcgtcccagccccagcggtgagccagttgcaggccttggc
aaggtgttcttgaagtatggtgatacggatggatcgtcgagggcaagaagcgggatgaat
ggtaggaagtttggaggtaaccaagtggttgctgtgttctaccctgaagacaagtttgaa
cagggagactacggagcctga

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