Raphanus sativus (radish): 108843346
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Entry
108843346 CDS
T06014
Name
(RefSeq) ATP-dependent zinc metalloprotease FTSH 11, chloroplastic/mitochondrial isoform X2
KO
K08955
ATP-dependent metalloprotease [EC:3.4.24.-]
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rsz01002
]
108843346
Peptidases and inhibitors [BR:
rsz01002
]
Metallo peptidases
Family M41: FtsH endopeptidase family
108843346
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M41
AAA
AAA_lid_3
AAA_5
AAA_16
AAA_22
AAA_28
TIP49
AAA_lid_PRS2_C
nSTAND3
RuvB_N
AAA_14
AAA_18
AAA_2
ATPase
AAA_17
IstB_IS21
DUF815
Zeta_toxin
Phasin_2
DUF4055
SLFN-g3_helicase
TsaE
Mg_chelatase
Motif
Other DBs
NCBI-GeneID:
108843346
NCBI-ProteinID:
XP_018472026
UniProt:
A0A6J0MKL5
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Position
2:24156131..24160786
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AA seq
783 aa
AA seq
DB search
MSSSTLQASLLLRPPPPPLHSFKPHHHRPLLSSSLRFNPQSLSSFYRLSSSILRFHPIPC
SLRQDNVASDSDFLPNEEVTDSPESRLVPESETNEGTNEETISGGGEDSEKKSKFQIVVL
MMGVWAAMKRAIEKVLEWEWLSWWPFSRQEKRLEKLIAEADANPKDAALQGALLAELNKH
IPEAVVQRFEQREHAVDSRGVAEYIRALVVTNSISDYLPDEHTGKPSTLPTLLQELKHRA
SGDMDESFVNPGISERQPLHVTMVNPKVSNKSRFAQELVSTILFTVAVGVVWLMGAAALQ
KYIGSLGGIGTSGVGSSSSYSTKEVNKEITPEKNVKTFKDVKGCDDAKQELEEVVEYLKN
PSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRV
RSLFQAAKKKAPCIIFIDEIDAVGSTRKQWEGHTKKTLHQLLVEMDGFEQNEGIIVMAAT
NLADILDPALTRPGRFDRHIVVPSPDVRGRQEILELYLQGKPMSDDVDVKAIARGTPGFN
GADLANLVNIAAIKAAVEGAEKLSAEQLEFAKDRIVMGTERKTMFVSEDSKKLTAYHESG
HAIVALNTKGAHPIHKATIMPRGSALGMVTQLPSNDETSVSKRQLLARLDVCMGGRVAEE
LIFGQDHITTGASSDLSQATELAQYMVSSCGMSEAIGPVHIKERPSSEMQSRIDAEVVKL
LREAYERVKSLLKRHEKQLHTLANALLEYETLTAEDIKRILLPKQEIDKFQEKQEEEGDL
VLA
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcctccactctccaagcttctcttctccttcgtcctcctcctcctcctctccat
tccttcaaacctcatcatcatcgtcctctcctctcttcttctctgcgtttcaaccctcaa
tctctctccagcttctaccgtctttcttcttcgattcttcgattccaccccatcccttgc
tccctccgccaagacaatgtcgcttccgattccgatttccttcccaacgaggaggttacg
gattctccagagagcagattggttccggaatcagagacaaacgaggggacgaatgaagaa
acgattagcggaggaggagaagactcggagaagaagagtaagtttcagatagtggtgctg
atgatgggagtatgggcagcgatgaagagagccatagagaaagtgttggaatgggagtgg
ctgagctggtggcctttctctcgccaagagaagcgtctcgagaagctaatcgccgaggcc
gacgccaatccaaaggacgctgctttgcagggagctttattagctgagctcaacaagcac
attcctgaggctgttgtccaacggtttgagcaaagggaacacgctgtggatagtagagga
gttgctgaatatattcgagctcttgtcgttactaattctatttctgactatcttcctgac
gaacacaccggcaagccatccactcttcccacactgctgcaagagctgaagcatcgtgca
tcaggcgatatggatgaatcttttgtcaaccctggtatatctgagaggcaaccattgcat
gttaccatggttaatccgaaagtttcaaacaaatcaagatttgcacaagagcttgtctct
accatcttgttcacagttgctgtgggagtagtctggttaatgggtgcagctgctctgcaa
aagtatattggaagcctgggaggaattggaacttcgggtgttggttcaagttcttcatat
tccacaaaagaagttaacaaagaaataactccagaaaagaatgtcaaaacgtttaaggat
gtaaagggttgtgatgatgcaaaacaagagctagaggaggtggtagaatatctgaaaaac
ccatcaaagtttacccgtcttggaggaaagttgccaaagggaattcttcttacgggggca
cctggtactggaaagacattgctggctaaagccattgctggagaagctggagtacccttc
ttctatagagctggatctgaatttgaagagatgtttgttggggttggagcacggcgtgtg
agatccttgtttcaggcagctaagaaaaaggcgccctgcatcattttcatcgatgaaatt
gatgctgtcgggtccacgagaaaacaatgggaagggcatacaaagaagacattgcatcaa
ctactcgtcgaaatggatggttttgagcagaatgagggaataatcgttatggctgctaca
aacttggctgatatacttgatccggccttgacaagaccgggtagattcgataggcatatt
gtggtccctagcccggatgtccgtggacgccaagagattttggaactctacctccaaggc
aaacctatgtcagatgatgtggatgttaaagctattgctcgcgggactcctggtttcaat
ggtgctgatcttgcaaacctggttaatattgctgccataaaggcagctgttgaaggggct
gagaagctatccgctgagcagttggaattcgcaaaggaccgaatagttatgggcacagag
aggaagacgatgttcgtatcagaggactcgaaaaagctcactgcctaccatgagagtggt
catgctatagtcgctttgaacacgaaaggtgcacacccgatccacaaagcaacaataatg
ccacgtggatctgcgttgggaatggttacgcagctaccttcaaacgatgaaacatcagtg
agcaaaaggcagttattagctcgtcttgatgtatgtatgggaggaagagtcgcagaggag
ctcatctttggccaggaccatatcaccactggagcaagtagcgatctctcccaggccaca
gaacttgctcaatatatggtatcgagttgtggaatgagtgaggcaataggaccagttcat
ataaaagaaagaccaagttctgaaatgcaatcacgcatcgatgcagaggttgtgaaactt
cttcgtgaggcatacgagcgagtgaaatctctcttgaaacggcatgagaagcagctacac
acgttagcaaacgcacttctagagtatgaaacgctaaccgcagaggacataaagcgtatc
ctccttccaaaacaagaaatagacaagtttcaggagaaacaagaagaagaaggagacttg
gtattggcctag
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