Raphanus sativus (radish): 108843347
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Entry
108843347 CDS
T06014
Name
(RefSeq) chaperone protein ClpC2, chloroplastic
KO
K03696
ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
rsz03110
]
108843347
Chaperones and folding catalysts [BR:
rsz03110
]
Heat shock proteins
HSP100
108843347
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
Clp_N
AAA_lid_9
ClpB_D2-small
AAA
AAA_5
AAA_16
Sigma54_activat
UVR
nSTAND3
AAA_22
TniB
NACHT
AAA_18
AAA_14
AAA_28
NBD_SMAX1
Mg_chelatase
Zeta_toxin
IstB_IS21
AAA_25
Torsin
DNA_pol3_delta2
Chalcone_3
Motif
Other DBs
NCBI-GeneID:
108843347
NCBI-ProteinID:
XP_018472027
UniProt:
A0A6J0MJE8
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All DBs
Position
2:complement(16439362..16443420)
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AA seq
929 aa
AA seq
DB search
MARLLTNFTVRPLLGPGRHVQSEEYRKPRRTCVKMMYSSQTPVLSFQSFTGLRATKAVDH
LIARPSHGFFNKANLQISSRKGRASRGVTKAMFERFTEKAIKVIMLSQEEARRLGHNFVG
TEQILLGLIGEGTGIAAKVLKSTGINLKDSRVEVEKIIGRGSGFMAVEIPFTPRAKRVLE
LSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENMGVDASNIRTLVIRMVGENNEVT
ANVGGGSSGNSKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILARRTKNNPCLI
GEPGVGKTAIAEGLAQRIASDDVPETIEGKTVITLDMGLLVAGTKYRGEFEERLKKLMEE
IRQSDDIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKD
PALERRFQPVKVPEPTVDEAIQILHGLRERYEIHHKLRYTDDALVAAAQLSHQYISDRFL
PDKAIDLIDEAGSRVRLRHAQVPEEARELEKQLRQITKEKNEAVRAQDFEKAGSHRDREI
ELRAEMAAVLAKGKEVSKAETEAGEEGGPTVTESDIQHIVSTWTGIPVEKVSSDESSRLL
KMEQTLHTRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAA
YYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTLVLFDEIE
KAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDE
KDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVVVRLKEK
EIELQVTERFKERVVDEGFDPSYGARPLRRAIMRLLEDSMAEKMLSREIKDGDSVIVDVD
AEGSVVVLNGKSGGGSIAEEAMEDPVFVL
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atggctaggctcttgactaatttcacagtccgtcctttactcggtcccggaagacatgtt
cagtccgaagagtatagaaaaccaagaagaacatgtgtgaagatgatgtactcttcacaa
actccggttctgagtttccagagcttcacagggttaagggctaccaaagcggtggatcat
ctaatagcaaggccttctcatggtttctttaataaggctaaccttcaaatctcatctcgg
aaaggaagagctagccgaggtgttacaaaagccatgtttgagcggttcaccgagaaggca
attaaggtcataatgctgtctcaagaggaagctcggagacttggacataactttgttggc
accgagcagatactgttgggtctcattggggaagggactgggatcgctgcaaaggttctt
aaatccacggggatcaatcttaaggattctcgtgtggaagtggagaagatcattggaaga
ggcagtgggtttatggctgtggagatcccttttactcctcgtgcaaagcgtgtcctggag
ttgtcactagaggaagctcgacaactcgggcataactacattgggtcagagcatctcttg
cttggtcttcttcgtgaaggggaaggtgttgcagctcgtgtccttgagaatatgggtgta
gatgctagtaacatccggacgctggttatacgtatggtcggagaaaacaatgaagtgacc
gcaaacgtcggtggaggatcaagcggaaacagcaagatgccaacactggaagagtatggg
actaacttaaccaaactagcagaggagggtaaactagatcctgttgttggaaggcagcca
cagattgaacgagtggtccagatcttggctcgaagaaccaagaacaacccttgtcttatt
ggagaacctggagttggtaagacagcaatagctgaaggactcgcacagagaatagccagt
gatgatgttcctgaaacaattgaggggaagacagttataactcttgatatgggtcttcta
gtggctggaaccaagtatcgtggagaattcgaggaaagattgaagaagcttatggaggag
atcagacagagtgatgacatcattctgtttattgatgaagtgcacactctgatcggtgca
ggagcagccgaaggtgccattgatgctgccaacatcttaaagccagctcttgccagaggt
gaattgcagtgtattggtgcaacaacattggacgagtacagaaagcacattgagaaagat
cctgcgttagagagaaggttccagcctgtgaaggtacctgaaccaactgttgatgaagct
atacagatcttgcacggtctccgtgagcggtatgagatccaccacaagctccgatacact
gacgatgccttggttgctgctgcgcaactctcacatcagtacatcagtgatcggtttcta
ccagacaaagccattgacttgattgatgaagctgggtctcgggttcgactgcgccatgct
caggtccctgaggaagctagagagcttgaaaagcaactaagacagatcactaaggagaag
aatgaagctgtgagagcccaagactttgagaaggctggttctcaccgtgaccgggaaata
gagctaagagccgagatggcagctgttttagccaaaggcaaagaagtgagcaaagctgag
acagaagctggggaagaaggaggacctactgtcactgaatccgacatccaacacattgtc
tccacctggacaggaatccctgtagagaaagtctcctccgatgaatctagccgtcttctc
aagatggagcagacgctacacacaagagtcattggccaagacgaagccgtcaaagccatt
agccgggccatcagacgtgcacgtgttggactcaagaacccgaaccgtcccatagcgagt
ttcatcttctctggtccaaccggtgtggggaaatcagagcttgccaaagctttagctgct
tactacttcggttcagaagaagcgatgatccgtctcgacatgagtgagttcatggaacgg
cacacggtctcaaaactcatcggttcgcctcctggttacgtagggtacacggaaggaggt
cagttaactgaggcggttcgacgcaggccttacacgcttgtcctcttcgacgaaatagag
aaagctcatccggatgtgttcaacatgatgcttcagatcctagaggacgggagactaaca
gacagcaaaggaagaactgttgatttcaagaacacgcttctgatcatgacatcgaacgta
ggaagcagcgtgattgaaaagggtggcagaagaatcgggtttgatctcgactacgacgag
aaagacagcagctacaacaggatcaagagcttggtcaccgaggaactgaagcagtatttc
agaccggagttcttgaacaggttagatgagatgattgttttcagacagctgacgaagctg
gaagtgaaggagattgctgatataatgcttaaagaagtggtggtgaggcttaaggagaaa
gagattgagcttcaagtgacggagaggtttaaggagagagtggtggatgaagggtttgac
ccgagttatggtgcgaggccgctgagaagagcgataatgaggcttctggaagatagcatg
gcggagaagatgctttcaagggagattaaagatggtgattcggtgattgttgatgttgat
gctgaaggaagtgtggttgtgttgaatggtaagagtggaggtggtagtattgctgaagaa
gccatggaagatccagtttttgtgttgtag
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