Raphanus sativus (radish): 108843351
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Entry
108843351 CDS
T06014
Name
(RefSeq) cell division control protein 48 homolog E
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
108843351
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsz03019
]
108843351
03009 Ribosome biogenesis [BR:
rsz03009
]
108843351
04131 Membrane trafficking [BR:
rsz04131
]
108843351
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rsz04147
]
108843351
Messenger RNA biogenesis [BR:
rsz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
108843351
Ribosome biogenesis [BR:
rsz03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
108843351
Membrane trafficking [BR:
rsz04131
]
SNARE
SNARE associated proteins
Others
108843351
Autophagy
Aggrephagy
Other aggrephagy associated proteins
108843351
Exosome [BR:
rsz04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
108843351
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
CDC48_2
AAA_16
AAA_2
AAA_33
AAA_5
AAA_22
AAA_14
TIP49
NPHP3_N
RNA_helicase
AAA_17
nSTAND3
AAA_28
Mg_chelatase
ATPase_2
AAA_18
Parvo_NS1
IstB_IS21
Viral_helicase1
ABC_tran
Vps4_C
AAA_7
NACHT
NB-ARC
AAA_lid_PRS2_C
TsaE
AAA_24
DUF815
Zeta_toxin
ResIII
Motif
Other DBs
NCBI-GeneID:
108843351
NCBI-ProteinID:
XP_018472032
UniProt:
A0A6J0MHU4
LinkDB
All DBs
Position
2:complement(25162007..25165424)
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AA seq
812 aa
AA seq
DB search
MSNQPESSSDSKSSKKDFSTAILERKKSPNRLVVDEAINDDNSVVSLHPATMEKLQLFRG
DTILIKGKKRKDTVCIALADESCEEPKIRMNKVVRSNLRVRLGDVISVHHCPDVKYGQRV
HILPLDDTIEGVTGNLFDAYLKSYFLEAYRPVRKGDLFLVRGGMRSVEFKVIETDPAEYC
VVAPDTEIFCEGEPIKREDEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGV
KPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKMAGESESNLRKAFEEAEK
NAPSIIFIDEIDSIAPKRDKTNGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDP
ALRRFGRFDREIDIGVPDEIGRLEVLRIHTKNMKLAEDVDLERISKDTHGYVGADLAALC
TEAALQCIREKMDVIDLEDESIDAEILNSMAVSNEHFHTALGNSNPSALRETVVEVPNVS
WEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANEC
QANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSVGDAGG
AADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEDSRLN
IFKACLRKSPVAKDVDVTALAKYTQGFSGADITEICQRACKYAIRENIEKDIERERRRSA
NPEAMEEDMVDDEVAEIRAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGIGTEFRF
DPTATGRTTGGGATADPFATSAAAADDDDLYS
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaccaacctgaatcatcttccgactcgaagtcatcgaagaaggatttcagtaca
gctatccttgagaggaagaagtctcctaaccgactcgttgtcgacgaagccatcaacgat
gacaactccgtcgtctctctccatcccgccaccatggaaaagctccagcttttccgcggc
gatacaattctcatcaagggaaagaaaaggaaggacactgtttgcattgctcttgccgat
gaatcatgcgaggaacctaagattagaatgaacaaggtcgtaaggtccaacttgagggtt
agactgggtgatgtcatctctgttcaccattgccctgacgtcaagtacggacagcgtgtt
cacatcttgcctcttgatgataccatcgaaggtgttactggaaacctcttcgatgcttac
ctcaaatcttacttccttgaagcataccgcccagtgaggaagggcgatctcttcctagtg
agaggaggaatgaggagcgtggagttcaaagtcatcgaaaccgatccagctgagtactgt
gtggtggctccagacactgagattttctgcgagggagaaccaatcaagagggaggacgaa
gaaaggctagacgaagtcggttacgatgatgttggtggcgtcaggaaacagatggctcag
atcagagagctcgttgagcttcctctgaggcatcctcagctcttcaagtcgatcggcgtg
aagccgccgaaaggtatcctcctctacggaccacccggatcagggaagactctcatcgct
cgcgccgtggctaacgagaccggagcgttcttcttttgtattaacgggcctgagatcatg
tcgaagatggcaggtgagagcgagagcaacttaagaaaggctttcgaggaggcggagaag
aatgctccttccattatatttatcgatgagattgattccattgcgcctaagagagataag
actaacggtgaggttgagaggaggatcgtctctcagctgctgacgctcatggatggactg
aagtcacgtgcgcatgtgattgtcatgggagcgacgaaccgtcccaacagtattgacccg
gctttgaggaggtttgggaggttcgacagggagattgacattggtgttcctgatgagatt
ggacgtcttgaagtgcttaggatccacaccaagaacatgaagcttgctgaagatgttgat
ctagagagaatctccaaggacacacatggatatgttggtgctgatcttgcagctctgtgc
actgaagctgctcttcagtgtatcagagagaagatggatgtgatcgacttggaagatgag
tctatcgacgctgagatcctcaactccatggcggtgtctaacgaacacttccacaccgct
cttggaaacagcaacccatctgcactccgtgaaaccgttgtggaggttccaaatgtctcc
tgggaggatattggaggtcttgagaatgttaaaagagagctgcaggagactgttcagtac
cccgtggagcatccagagaagttcgaaaagtttgggatgtctccatcgaagggagttcta
ttctacggtcctcccggatgtgggaaaacactcttagccaaagctatagcaaacgagtgc
caagcgaacttcatcagcgtaaagggacccgagcttctcaccatgtggtttggagagagc
gaggccaacgtccgtgagatcttcgacaaggctcgccaatctgctccttgcgttctcttc
ttcgacgagctagactccattgctactcagagagggagcagcgtgggcgatgcgggaggt
gcagccgatagagttttgaaccagcttctgacggagatggatgggatgaatgccaagaag
actgtgttcatcatcggtgcaactaacaggcctgatattatagatccagctcttcttcga
cctggaagactcgaccagctcatctacattcctttacctgatgaggattctcgtctcaac
atcttcaaggcgtgcttgaggaagtctcctgttgctaaagatgttgacgtgactgcactc
gccaagtacactcaggggttcagcggtgctgatatcactgagatttgccagagagcttgc
aagtacgccattagagaaaacatcgaaaaggatatagagagggaacgtagaaggagcgca
aatccagaggcaatggaggaagatatggtggatgatgaggttgcagagataagagctgct
catttcgaagagtcgatgaagtatgcaaggaggagtgtgagtgatgctgatattcgcaag
taccaggcttttgctcagacgctgcagcaatcaagagggattggaactgagtttaggttt
gacccaactgcgactggacgcactactggtggtggtgcgactgctgatccctttgccact
tctgcagcagctgccgatgatgatgatctctatagttag
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