Raphanus sativus (radish): 108843461
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Entry
108843461 CDS
T06014
Name
(RefSeq) uncharacterized protein LOC108843461
KO
K15559
regulator of Ty1 transposition protein 103
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rsz03021
]
108843461
Transcription machinery [BR:
rsz03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
108843461
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
CTK3
Laminin_I
CREPT
DUF724
SKA1
DUF4763
UPF0122
Motif
Other DBs
NCBI-GeneID:
108843461
NCBI-ProteinID:
XP_018472165
UniProt:
A0A6J0MI47
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All DBs
Position
2:complement(26677103..26679849)
Genome browser
AA seq
485 aa
AA seq
DB search
MSSVFSEEILIDKLAKLNSTQQSIETLSHWCIFNRVKAELIVTTWEKQFHSTEMAQKVPL
LYLANDILQNSKRQGNEFVDEFWNVLPKAVKDIAVSQGDDRGKGVVSRLVKIWEERKVFG
SRSKNLRDAMLGEDCPLPLDVTKKRSRGSKSSKRDSKSSRTKLSSGGVAEKIASAYHLVV
AENSNEEAEMSKCKSAVKRIRKMEKDVEEAFSTVKDNPKRKSLAKQLEEEEYLLRQCIEK
LKSVQGSRTSLVNQLKDALREQESELKNLEAQIQVAQEQTEEAQNMQKRLKDEDYAPKPT
TVAAPGSVSATDNNNNSTKSGQASKMTPASIAAMLTASTSSHMIMQSVLSSFAAEATKTS
GLSKSESTVPVSDTNAFAPPYNNPQNQTPTAQGQVQVQGQYHLISNPAAPPPPLPPQFLK
QPVMNNPYGFGNIPLMPPGLPPPPPPPHMQQPQIPQSNLAQQQQPQQGTTFQPPGIMYYG
PPHHS
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtgtattcagcgaagagatcctaatcgataagctcgcgaagctcaacagcact
caacagtccatcgaaacgttatcgcattggtgtatattcaatcgggtcaaagctgaattg
atcgtgacgacatgggagaaacagtttcacagcacggagatggctcagaaagtgcctctc
ttgtatttggctaatgatattcttcagaacagtaagcgtcagggcaacgagttcgtggac
gagttctggaatgttctccccaaggcggtcaaagacattgctgtttctcagggtgatgat
cgtggcaaaggcgttgtctcccgtctggtcaagatatgggaagaaagaaaagtgtttgga
tcacgttctaagaatcttagagacgcgatgcttggtgaagattgccctctcccacttgat
gtcaccaagaagcgatcccgtggatccaaatcctctaaacgtgattcaaagtcgtccaga
acgaaactatcaagtggaggtgtagctgagaagatagcatcagcatatcatttggttgtt
gctgaaaactcaaatgaagaagctgagatgagtaaatgcaagtctgctgttaaacgaatc
aggaagatggaaaaagatgttgaagaagctttctctactgtgaaagacaacccgaagaga
aaatcactggcgaaacaactggaagaggaagaataccttttgagacaatgtattgagaaa
ctcaaatccgttcaaggaagtagaacctcccttgtaaaccagctcaaagacgcactacgc
gaacaggaatctgaactgaagaatcttgaagctcagattcaggtagcacaagaacaaaca
gaggaagctcaaaacatgcagaaacgtctcaaagatgaagattatgcaccaaaaccaaca
accgttgctgctccgggctcagtctctgcaactgataacaacaacaacagcaccaagtct
ggtcaagcatcaaaaatgacgcctgcttctatagctgcgatgctcacagcatctacctca
tcgcatatgatcatgcaatctgttctatcttcatttgcagctgaagctacaaagacttct
ggtctatccaaatcagagagcacagttcccgtttcagacactaatgcttttgctcctcct
tacaacaacccccagaaccagacacccacagcacaaggtcaagttcaagttcaaggtcag
taccatttgatctctaatccagcagcaccaccaccaccattaccaccgcagtttctaaaa
cagccggtaatgaacaatccttatgggtttggtaacattccgttaatgccacctggactt
ccgccgcctccaccaccacctcatatgcaacagcctcagattcctcagtcaaacttagct
cagcagcaacaacctcaacagggtacaactttccagccaccagggataatgtattatgga
cctccacaccattcttga
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