Raphanus sativus (radish): 108843897
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Entry
108843897 CDS
T06014
Name
(RefSeq) probable galacturonosyltransferase 6 isoform X1
KO
K13648
alpha-1,4-galacturonosyltransferase [EC:
2.4.1.43
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz00520
Amino sugar and nucleotide sugar metabolism
rsz01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
108843897
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
rsz01003
]
108843897
Enzymes [BR:
rsz01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.43 polygalacturonate 4-alpha-galacturonosyltransferase
108843897
Glycosyltransferases [BR:
rsz01003
]
Polysaccharide
Structural polysaccharide
108843897
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_8
Glyco_transf_24
CorA
Med9
Motif
Other DBs
NCBI-GeneID:
108843897
NCBI-ProteinID:
XP_018472554
UniProt:
A0A6J0MK87
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Position
1:3776026..3779454
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AA seq
597 aa
AA seq
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MNQIRRWQRIMFLSLLSISVLAPLVFVSNRLNTITPVGRREFMEELSNFRYRTNDLRLNA
IEHEDGQGLKGPRLILYKDGEEFNSTVSDDEKDKTIDGNNLKYREGKVIDSQQTTTLSSD
SKDQILRVNQLANKTEFKPPLSKGEKKTKVHQSDRATDTKIKEIRDKIIQAKAYLNFAPS
GSNSQIVKELRTRLRELERAVGDVTKDKDLSKGALRRLKPLEASLYKASRVFNNCPAIAN
KLRAMNYNTEELVQAQKNQASYLMHLAARTTPKGQHCLSMRLTSEYFALDPEKRQMPNQE
KYNDPRLNHYVVFSDNVLASAVVANSTISSSKEPEKIVFHVVTDSLNYPAISMWFLLNIQ
SVAAIQIKNIDDMDVLPSDYDQLLMKQSSNDPRFISTLNHARFYLPDIFPGLNKMVLFDH
DVVVQRDLSRLWSIDMKGKVVGAVETCKEGEPSFHSMSTFINFSDAWVSGKFSPKACTWA
FGMNLVDLEEWRRRKLTSTYIKYFNLGTKRPLWKAGSLPIGWLTFYRQTLALDKRWHVMG
LGREAGIKTVDIEQAAVIHYDGIMKPWLDIGIDKYKRYWNMHVPYYHSYLQQCNIHA
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaaattcgtcgatggcagaggatcatgttcctctccctgctatcgatctccgtg
ttggctcctctcgttttcgtctcgaatcggctcaacaccatcactcccgttggtcggagg
gaatttatggaagaactatccaacttcagatacaggactaatgacctcaggcttaacgct
atcgaacatgaggatggacaaggcttgaaggggccaaggctcattctctacaaggatggg
gaggagtttaattccactgttagtgatgatgagaaagataaaactattgatggcaataat
cttaaatacagggaagggaaagtaattgattcacagcagactacgacactaagctctgat
tccaaggatcaaattctaagagttaaccaacttgctaataaaacggagttcaaaccccca
ttatccaaaggtgaaaagaaaacaaaggttcatcagtctgatagagcaacagatacgaag
ataaaggaaatcagagacaagattatacaagccaaggcctatctgaattttgccccgtct
ggaagtaattctcagattgtcaaggagttgagaactcgattgagagagctggaacgggct
gttggtgatgtgacaaaggataaggatttgtcaaagggcgcgcttcggaggctgaagccc
ctggaagcttcattgtacaaggctagtcgtgtctttaacaattgccctgccatagctaac
aaactccgtgccatgaattataacacagaagaactagttcaggcgcagaaaaatcaagca
tcatatctaatgcaccttgctgcaaggaccaccccaaaagggcaacactgtctctccatg
cggttgacatcggagtactttgccttggatcctgaaaaaaggcagatgcctaaccaggaa
aagtacaatgatcctagactcaatcattatgttgtcttctctgacaatgttttggcttct
gctgtcgttgctaactctacgatatcttcttcaaaggaaccggaaaaaatagtattccat
gtcgtgactgattcacttaactacccagcaatctcaatgtggtttttgctaaacatccaa
agtgtagctgctatccaaatcaaaaacattgatgatatggatgtcctgccttcagattat
gaccagttgctgatgaagcaaagctccaatgacccaagattcatctctaccctcaatcac
gcacgcttctatctccccgatatattcccgggtttgaataagatggtactctttgaccat
gatgtagttgttcaacgagatttaagtagactgtggagcatcgatatgaaggggaaggtg
gttggtgctgtagagacttgtaaagaaggcgaaccttcattccattcaatgagcacattt
attaatttctcagacgcatgggtctctgggaaattcagtcctaaagcttgcacgtgggcg
tttgggatgaatcttgttgatctcgaagaatggagaagacggaagttgacttctacatac
attaaatacttcaacctgggaacaaagagacctttgtggaaagctgggagcttaccaata
ggttggttgactttctataggcaaacattagcgttggacaagagatggcatgtgatgggg
ttaggacgcgaagcaggcatcaaaacggttgacattgaacaagccgcggttatacactac
gacgggatcatgaagccgtggttggatattggaatagataaatacaaaagatactggaac
atgcatgtcccttactatcactcctacttgcaacagtgcaatattcacgcttga
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