KEGG   Raphanus sativus (radish): 108843917
Entry
108843917         CDS       T06014                                 
Name
(RefSeq) histone-binding protein MSI1
  KO
K10752  histone-binding protein RBBP4
Organism
rsz  Raphanus sativus (radish)
Pathway
rsz03082  ATP-dependent chromatin remodeling
rsz03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    108843917
   03083 Polycomb repressive complex
    108843917
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rsz03036]
    108843917
Chromosome and associated proteins [BR:rsz03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     108843917
  Histone modification proteins
   HAT complexes
    HATB complex
     108843917
   HDAC complexes
    Sin3A-HDAC complex
     108843917
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     108843917
    PRC2.2
     108843917
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     108843917
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    108843917
  Chromatin remodeling factors
   NuRD complex
    108843917
   NuRF complex
    108843917
   NuRF complex (fruit fly)
    108843917
SSDB
Motif
Pfam: CAF1C_H4-bd WD40 WD40_Prp19 WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 Beta-prop_RIG_2nd Beta-prop_EML_2 WD40_WDHD1_1st WDR55 Beta-prop_TEP1_2nd EIF3I Beta-prop_EML Beta-prop_WDR75_1st WD40_RFWD3 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 Beta-prop_SCAP eIF2A Beta-prop_HPS5 Beta-prop_RIG_1st WD40_MABP1-WDR62_1st NBCH_WD40 Beta-prop_SPT8 MIOS_WD40
Other DBs
NCBI-GeneID: 108843917
NCBI-ProteinID: XP_018472578
UniProt: A0A6J0MKY9
LinkDB
Position
Unknown
AA seq 424 aa
MGKDEEEMRGEIEERLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDRDEPPGKD
YSVQKMILGTHTSENEPNYLMIAQVQLPLDDTESEARQYDDERSEFGGFGCATGKVQIIQ
QINHEGEVNRARFMPQNPFVIATKTVNAEVYVFDYSKHPSKPPLDGACNPDLRLRGHSSE
GYGLSWSKFKPGHLLSGSDDAQICLWDINATPKNKVIDAQQIFKAHEGVVEDVAWHMSHE
YLFGSVGDDQYLLIWDLRSPSASKPIQSVVAHSMEVNCLAFNPINEWVVATGSTDKTVKL
FDLRKLTSALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTAEDAE
DGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIYHDEDDAPGEEP
IKGS
NT seq 1275 nt   +upstreamnt  +downstreamnt
atggggaaagacgaagaggaaatgcgaggggagatcgaggagcgactaatcaacgaggag
tacaagatctggaagaagaacacccctttcctctacgatctcgtcatcactcacgctctc
gagtggccttccctcaccgtcgagtggctcccagaccgcgacgagcctcccggcaaagac
tactccgtccagaagatgattctcggcacccacacctcagagaacgagcccaattacctc
atgatagctcaggtccagcttcctctcgacgacaccgagagcgaggcgcgtcagtacgac
gacgaacggtccgagtttggtgggtttggctgcgccaccggaaaggtgcaaattatccag
cagataaaccacgagggggaggtgaacagagctcggttcatgcctcagaaccctttcgtg
attgccacgaagacggtaaacgcggaggtgtatgtgtttgattacagcaagcacccgtct
aagccgccgctcgatggagcttgcaaccctgatttgaggctgaggggtcacagctccgag
gggtatggtttgtcttggagtaagttcaagccgggtcatttgctcagtggatctgatgac
gctcagatctgcttgtgggatattaacgccactcctaagaacaaggtcattgacgctcag
cagatctttaaggctcatgaaggggtggtggaagatgttgcgtggcatatgagtcatgaa
tatctgtttggatccgttggagatgatcagtaccttcttatatgggatctgcgttctcca
tctgctagtaaaccaatacagtctgtggttgctcactccatggaggttaactgcttagcc
ttcaacccaatcaatgagtgggttgtggcaacagggtcgactgataagactgttaaattg
ttcgatctacggaagctaaccagtgctcttcacacatttgacagccataaagaggaggtt
ttccaagttggttggaacccgaagaacgagactatcttagcctcatgttgccttggtaga
aggcttatggtttgggaccttagcaggatcgacgaggaacagacagcagaggatgcagag
gacggtccaccagagctgctgttcatccacggtggtcacaccagcaaaatatcagatttc
tcgtggaatccgtgtgaagactgggttatttccagtgtagccgaggacaacatactccaa
atatggcaaatggctgagaacatttatcatgacgaggatgatgccccaggggaagaacca
ataaaaggttcttaa

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