Raphanus sativus (radish): 108843917
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Entry
108843917 CDS
T06014
Name
(RefSeq) histone-binding protein MSI1
KO
K10752
histone-binding protein RBBP4
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03082
ATP-dependent chromatin remodeling
rsz03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
108843917
03083 Polycomb repressive complex
108843917
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rsz03036
]
108843917
Chromosome and associated proteins [BR:
rsz03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
108843917
Histone modification proteins
HAT complexes
HATB complex
108843917
HDAC complexes
Sin3A-HDAC complex
108843917
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
108843917
PRC2.2
108843917
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
108843917
Heterochromatin formation proteins
Other heterochromatin formation proteins
108843917
Chromatin remodeling factors
NuRD complex
108843917
NuRF complex
108843917
NuRF complex (fruit fly)
108843917
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAF1C_H4-bd
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_EML
Beta-prop_WDR75_1st
WD40_RFWD3
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_SCAP
eIF2A
Beta-prop_HPS5
Beta-prop_RIG_1st
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_SPT8
MIOS_WD40
Motif
Other DBs
NCBI-GeneID:
108843917
NCBI-ProteinID:
XP_018472578
UniProt:
A0A6J0MKY9
LinkDB
All DBs
Position
Unknown
AA seq
424 aa
AA seq
DB search
MGKDEEEMRGEIEERLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDRDEPPGKD
YSVQKMILGTHTSENEPNYLMIAQVQLPLDDTESEARQYDDERSEFGGFGCATGKVQIIQ
QINHEGEVNRARFMPQNPFVIATKTVNAEVYVFDYSKHPSKPPLDGACNPDLRLRGHSSE
GYGLSWSKFKPGHLLSGSDDAQICLWDINATPKNKVIDAQQIFKAHEGVVEDVAWHMSHE
YLFGSVGDDQYLLIWDLRSPSASKPIQSVVAHSMEVNCLAFNPINEWVVATGSTDKTVKL
FDLRKLTSALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTAEDAE
DGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIYHDEDDAPGEEP
IKGS
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggggaaagacgaagaggaaatgcgaggggagatcgaggagcgactaatcaacgaggag
tacaagatctggaagaagaacacccctttcctctacgatctcgtcatcactcacgctctc
gagtggccttccctcaccgtcgagtggctcccagaccgcgacgagcctcccggcaaagac
tactccgtccagaagatgattctcggcacccacacctcagagaacgagcccaattacctc
atgatagctcaggtccagcttcctctcgacgacaccgagagcgaggcgcgtcagtacgac
gacgaacggtccgagtttggtgggtttggctgcgccaccggaaaggtgcaaattatccag
cagataaaccacgagggggaggtgaacagagctcggttcatgcctcagaaccctttcgtg
attgccacgaagacggtaaacgcggaggtgtatgtgtttgattacagcaagcacccgtct
aagccgccgctcgatggagcttgcaaccctgatttgaggctgaggggtcacagctccgag
gggtatggtttgtcttggagtaagttcaagccgggtcatttgctcagtggatctgatgac
gctcagatctgcttgtgggatattaacgccactcctaagaacaaggtcattgacgctcag
cagatctttaaggctcatgaaggggtggtggaagatgttgcgtggcatatgagtcatgaa
tatctgtttggatccgttggagatgatcagtaccttcttatatgggatctgcgttctcca
tctgctagtaaaccaatacagtctgtggttgctcactccatggaggttaactgcttagcc
ttcaacccaatcaatgagtgggttgtggcaacagggtcgactgataagactgttaaattg
ttcgatctacggaagctaaccagtgctcttcacacatttgacagccataaagaggaggtt
ttccaagttggttggaacccgaagaacgagactatcttagcctcatgttgccttggtaga
aggcttatggtttgggaccttagcaggatcgacgaggaacagacagcagaggatgcagag
gacggtccaccagagctgctgttcatccacggtggtcacaccagcaaaatatcagatttc
tcgtggaatccgtgtgaagactgggttatttccagtgtagccgaggacaacatactccaa
atatggcaaatggctgagaacatttatcatgacgaggatgatgccccaggggaagaacca
ataaaaggttcttaa
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