Raphanus sativus (radish): 108843954
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Entry
108843954 CDS
T06014
Name
(RefSeq) protein argonaute 6
KO
K11593
eukaryotic translation initiation factor 2C
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsz03019
]
108843954
03036 Chromosome and associated proteins [BR:
rsz03036
]
108843954
Messenger RNA biogenesis [BR:
rsz03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
108843954
Chromosome and associated proteins [BR:
rsz03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
108843954
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
108843954
microRNA pathway
RISC loading complex
108843954
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
PAZ
ArgoN
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
108843954
NCBI-ProteinID:
XP_018472619
UniProt:
A0A6J0MKF3
LinkDB
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Position
3:complement(18841977..18847603)
Genome browser
AA seq
867 aa
AA seq
DB search
MPITPEEPSHRDYAITTRLGVGSTGRRLQLCTNHFNVSLGLPDVVFYQYTVSITTGDGEN
VQGKGISRKIIGQLYKTYSSDLDGKRLAFDGEKTLCTVGPLPRNDFDFQVILEGSFSKRD
CGLSGGGTPSGSSKRSKLSFLPRSYRVQIHFSAKVPLKSVLVTQRGVDTSDNDSQDAVRV
LDIVLRQQAAERGCLLVRQAFFHNDMNSVDVGGGVIGIRGFRSSFRPIHEGLSLNIDVST
TMVLKPGPVIEFLKANQNVELPRQIDWIKASKMLKHLRVKASHRNMEFKIIGLSAKPCNQ
QLFSMKIKDGECEGQTKEITVYEYFKQTYTEPTYSAYLPCLDVGKPDRPNYLPLEFCSLV
SLQRYTKPLSVRQRALLVEKSRQKPLERIKALNDAMDTYCYDKDPFLAGSGISIEKQMSL
AEGRVLNPPMLKFGKNEDFLPSNGRWNFNKKMVLEPRAIKNWAIVNFSFPCDSSHISREL
ISCGMSKGIEIDRPFALVEEDPQSKNLGAVKRVEKMIAKMKSKFPVDPPQFILCVLPERK
NSDIYGPWKKVCLTEAGINTQCICPIKISDQYLTNVLLKINSKLGGINSLLGMECSSNVP
LINKIPTLILGMDVSHGSPGRADVPSVAAVVGSKNWPLISRYRAAVRSQSPKLEMIDSLF
QPVDDPVNGDNGIMNELFVEFFKTSNARKPKQIIIFRDGVSESQFNQVLNIEVDQIIKAY
QRLGETDVPKFTVIVAQKRHHTKLFQAKGHENVPAGTVVDTKIVHPTNYDFYMCAHAGII
GTSRPAHYHVLLDEIGFSPDELQNLIHSLSYVNQRSTTATSIVAPVRYAHLAAAQFAQFT
KFEDVSEEKVPELPRLHERVESNMFFC
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atgcctataacaccagaagaaccgagccatcgagattatgccatcacaactaggcttggg
gttggaagcactggcaggagactacagctctgcaccaatcacttcaatgtttctttggga
ctgcccgatgttgttttctaccagtacactgttagtatcaccacaggagatggcgaaaat
gtccaagggaaaggaattagcagaaagattattggccagctttacaagacttactcttct
gatcttgatggtaaaaggctggcctttgatggagagaagactttgtgtacagttggtcct
ctgccacgaaacgactttgactttcaagtcatcttggaaggttctttttcgaaacgtgac
tgtggcctctctggtggtggtactccttctggttcttccaagagatcaaagctctctttc
ctgccgagaagttacagggttcaaattcacttctctgcaaaagtacccttaaagagtgtt
cttgtcactcagagaggagttgatacatcagataacgacagtcaggatgcagttagagtg
cttgacattgtactgaggcagcaagcagctgaaaggggatgcctgttagtcagacaggca
tttttccacaacgatatgaactctgttgatgttgggggaggcgtaataggtatccgaggt
ttccgctccagctttcgtccaatccacgaaggactctcgcttaacattgatgtgtcaaca
actatggtcttaaaaccgggtccagttatcgagtttctgaaagccaatcagaatgtcgag
ttacctagacagatcgactggattaaggccagcaaaatgcttaaacatctgagggtaaag
gcatcacatcgtaacatggaattcaaaattataggtctaagtgcgaaaccgtgcaatcag
caactgttttcaatgaaaattaaagatggcgagtgtgaaggacagactaaagagattacc
gtgtatgagtatttcaagcaaacttacacagagcctacttattctgcgtacttgccatgc
cttgatgtcggcaagccagatcgccccaactatcttccgctggagttttgtagtcttgta
tctctgcaacgttacacaaagccattgtcagtgaggcaaagagctttacttgttgaaaaa
tcaagacaaaaacccctagagagaattaaagcactcaacgatgcaatggacacctactgc
tatgataaagatccgtttttggccggaagcggcatatctattgaaaagcaaatgagtcta
gctgaaggccgggttctaaatcccccaatgctgaagttcggaaagaatgaggatttttta
cctagcaacggacgctggaactttaacaagaagatggttctagaaccaagggctattaag
aactgggctattgtcaacttctcttttccatgcgacagtagccacatttcccgtgagctc
ataagctgtggcatgagcaaaggcatcgaaattgatcgaccttttgcactagttgaagag
gatccccagtctaaaaacttgggtgctgttaaaagggtagaaaaaatgattgcaaagatg
aagtcgaaatttccagtcgatcctcctcaattcattctctgtgtcttgccagaacggaag
aactcagatatctatggtccctggaagaaggtttgtctcactgaagcagggatcaacaca
caatgcatctgccccatcaagatcagtgaccaatatctcaccaatgtacttctgaagatt
aattccaagcttggtggaatcaattctctgttgggaatggagtgctcttctaacgtccca
ttgattaacaaaattcccaccttaatcttgggtatggatgtatctcatgggtctccaggt
cgtgcagatgttccttcagtagcagcggttgttggttcaaaaaactggccattaatctca
aggtatagggcagctgtgagaagtcagtcaccaaaactggagatgatcgattcgctcttc
caaccagttgacgaccctgtgaacggagacaacggtatcatgaatgaattgtttgtggaa
tttttcaaaacaagcaacgcacgaaagcctaagcagattataattttcagggatggagta
agtgaatcacagttcaaccaagtcttgaacattgaggtggatcagattataaaggcgtat
caacgtctcggtgaaaccgatgtgccaaagttcactgtcattgtcgctcagaaaagacac
cacaccaagttgtttcaagctaagggtcatgaaaatgttcctgcaggaaccgtagtggac
accaagattgtacatccgaccaactacgatttttacatgtgtgctcatgcgggaataata
ggaacttcaagaccggctcactatcatgtcttgctggatgagattggtttctctcccgat
gagttgcagaatctcatccattctctttcctacgtcaaccagcggagcacaactgcaaca
tcaattgtggctccagtgcggtacgctcatctcgcagcagctcagtttgcgcagttcaca
aagttcgaagatgtatcggaggagaaagttccggagcttccgcgtttgcacgagagagtc
gaaagcaacatgttcttctgctga
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