Raphanus sativus (radish): 108843967
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Entry
108843967 CDS
T06014
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 12 isoform X1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
108843967
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rsz04040
]
108843967
Ion channels [BR:
rsz04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
108843967
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GFIT
Motif
Pfam:
Ion_trans
UBM
Motif
Other DBs
NCBI-GeneID:
108843967
NCBI-ProteinID:
XP_018472638
UniProt:
A0A6J0ML48
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Position
3:433007..446966
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AA seq
464 aa
AA seq
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MPLIKSIYGLYLHPEVSRFIIGKMERSSTTKSVRESVRGSLKTAYIKMKTPENWRKIILF
VCVVALGIDPLYLFVPVVDSPNFCFTFDKKLATGVSVLRTFIDVLYVVHIISNFMRYSNG
QLNFHSKPKWEPYFFIFHTIVDILSVLPSPQVLVLTLMRRSDSLVSREILKWIILSQYIP
RILRIYPLYKEVTKASGTVAETKWIGAAFNLFLYMLHSHVFGAFWYVSSVEKINKCWRLA
CPDIPGCNLKFQFCGQEGGNNIGALNTSCPLIEPDQITNSTVFNFGMYIDALKSGIVEVN
PDDFPRKFFYCFWWGLRNISALGQNLQTSNSVGDIVFALIICVSGLLLFAVLIGNIQKFL
QSTTIRLDAMLEKKRDTETWMSNNNLPKHIRESIRKHDEDKWKSTRGIDHETILKSLPED
IRQQTELHIERNSLNSIFSKSVRGCRRLIWKSSDQCRVTATKKR
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgcccctgataaagtctatttatgggctatacctccacccggaggttagcaggtttata
attggaaaaatggaaagatcttcaacgacaaagtcagtcagggagagtgttagaggaagc
ttaaagacagcttacatcaagatgaaaactcctgaaaactggaggaagataatcctgttc
gtttgtgttgttgctttgggtattgatcctttgtatctctttgtacctgtggttgattct
cctaacttctgcttcactttcgacaagaagcttgccacaggagtatctgtccttcgtacc
ttcattgacgtattatatgtggttcatatcatttcgaatttcatgagatattcaaatggc
cagttaaacttccattctaagcctaaatgggaaccatattttttcatctttcataccatt
gttgacattttgtctgttctccccagtcctcaggttctcgttctcactttaatgcgtcgg
tctgactcgctcgtgtcaagagaaatactgaaatggattatactttctcaatatatacca
agaatcctacgtatctatccgctttacaaagaagtgacaaaagcctctggtacagtagca
gaaacaaagtggattggagctgcttttaaccttttcctctacatgttgcacagtcatgtg
tttggggctttctggtacgtgagttcagtagaaaaaattaacaaatgttggcgtctagca
tgtcctgatatcccgggatgcaatctcaaattccagttctgtggacaagaaggtggaaac
aacattggtgcattgaacacttcatgcccattaatcgaacctgaccaaatcacaaactca
acggtcttcaactttggtatgtacattgatgcattgaagtcagggatcgtagaggtcaat
ccagatgattttccaaggaaattcttttactgcttttggtggggtctacgaaatattagt
gctttaggtcaaaacctacagacaagcaactctgttggggatatcgtctttgctcttatc
atctgcgtctctggtttacttttgtttgctgtcctcattggaaacatccagaagtttttg
caatcaactacaattagattagacgcaatgttggagaaaaagagagacactgaaacatgg
atgtcgaataataatctgccaaaacatataagggaaagcattagaaaacacgacgaagac
aaatggaaaagtaccagaggcatcgaccatgaaacaattcttaagagccttccagaagac
atcaggcaacaaactgaacttcatattgaacggaattctttaaacagtattttttccaaa
tctgttcgtggctgtagacgacttatatggaagtcttctgatcaatgtcgagtcacagcc
acgaagaagaggtga
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