Raphanus sativus (radish): 108844040
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Entry
108844040 CDS
T06014
Name
(RefSeq) RNA pseudouridine synthase 7
KO
K15454
tRNA pseudouridine32 synthase [EC:
5.4.99.28
]
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rsz03016
]
108844040
Enzymes [BR:
rsz01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
108844040
Transfer RNA biogenesis [BR:
rsz03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
108844040
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-GeneID:
108844040
NCBI-ProteinID:
XP_018472736
UniProt:
A0A6J0MML7
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Position
3:complement(20758372..20760966)
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AA seq
393 aa
AA seq
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MKRKLEDDDAVEKPASSSSIIATSMNTSDIVLQTSSPKLSQKQDYIFHGGRRHVRPYYFE
FISHVNKRWTGKTIVDLFADEFKGRQRDYYVGAVKSGRIKVDGETVPVSYIVKSSQKITH
FVHRHEPPVMTDDVEILVNEPDVVTVCKPASIPVHPCGQYRKNTVVGILDAEHDLGPLFP
IHRLDRLVSGLLIIARTAAKADFFRQQIEGGMVKKRYIAKVIGVFPEDEKVVDANINYNG
SEGRSTAEDANSSGDDKKVKGKPACTKFTRIDTNGTHSLVLCEPVTGRTHQIRVHLQYTG
HPIGNDPLYLNQQVDNLVTKIAKRIDAGERKMVSPDDYVYSSDDFSIDPMCTNCPKLIPQ
GYEEHDEALWLHCVRYSGTGWEYDCPYPSWASL
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgaaagctggaagacgacgacgccgtagagaaacccgcctcttcttcttctatc
atcgccactagcatgaatactagtgacatagtgttacagacatcatctcctaaactctca
cagaagcaagactacatcttccatggagggagacgccatgtgaggccgtactacttcgag
ttcatctctcatgtgaacaaacgctggactgggaaaacaatcgtggacttgttcgctgat
gaattcaaaggcagacaacgtgactactatgttggggcagtcaaaagtggaagaatcaaa
gttgatggagaaactgtacctgtttcttacattgttaaatcttctcaaaagatcactcat
ttcgtccacaggcatgaaccaccggtgatgactgatgatgtagagatccttgtgaatgaa
cctgatgttgttactgtctgcaaacccgcttctattcccgtgcatccatgtggtcaatat
cgtaagaacacggttgttggaatccttgatgctgagcatgacctcggccctctttttcct
attcaccgattagaccgtttggtttctggattgctcatcatagctagaactgctgccaaa
gctgattttttcaggcaacagatcgagggtggaatggtgaagaaacgttatattgcaaag
gttattggcgtgttcccagaagatgagaaagtagtcgacgccaacataaactataatggt
agtgaaggaagaagtacagcagaggacgccaattcaagtggtgatgataagaaggtgaag
gggaagcctgcgtgtaccaagttcaccagaatcgacacaaatgggactcatagcctcgtc
ttgtgtgaaccagtgacaggacgaactcatcaaatacgagtgcatctacaatatacaggg
catcccatagggaatgacccgctttatctcaatcaacaagtggataatctggtgaccaag
attgctaaaaggattgatgcgggtgagagaaagatggtgtccccagacgactacgtgtat
tctagtgatgatttcagcatcgatccaatgtgcacaaactgcccaaagttgatcccacaa
gggtacgaggagcatgatgaggctctttggttgcattgcgttcgatactctggaacagga
tgggaatacgattgtccttatccatcttgggcatctctttaa
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