Raphanus sativus (radish): 108844202
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Entry
108844202 CDS
T06014
Name
(RefSeq) putative E3 ubiquitin-protein ligase SINAT1
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
108844202
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rsz04121
]
108844202
Enzymes [BR:
rsz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108844202
Ubiquitin system [BR:
rsz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
108844202
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
zf-Di19
Motif
Other DBs
NCBI-GeneID:
108844202
NCBI-ProteinID:
XP_018472926
UniProt:
A0A6J0MN34
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All DBs
Position
3:13898237..13900619
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AA seq
306 aa
AA seq
DB search
MAPGGSTYKEALETNSKGFDYEVKMAKTEANNNKPAKATSASFGKYAIHNSNGVYELLEC
LVCTNLMYPPIHQCPNGHTLCSSCKQKVQNTCPTCRYELGNIRCLALEKVAESLEVSCQN
LGCHDIFPYYSKLKHEQHCRFRSYNCPYAGAECSVTGDIPTLVDHLKDDHKVDMHSGCTF
NHRYVKSNPQDVENATWMLTVFNCFGRQFCLHFEAFQLGTAPVYMAFLRFMGDENEAKKF
SYSLEVGAHGRKLTWQGIPRSIRDGHRKVRDSQDGLIIPRNMALYFSGSDKEELKLRVTG
RIWREE
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atggctcctggtggaagtacttacaaagaagccttggagactaactcgaaaggctttgat
tacgaggttaagatggctaaaacagaggctaataacaacaaaccagccaaagcaactagt
gcctcctttggcaaatacgcaatccacaatagcaatggtgtctacgagctactcgaatgt
ctcgtttgcacaaatctaatgtatcctccgattcatcagtgtcccaacggccacacgttg
tgttcaagctgcaaacaaaaagtgcagaacacgtgccccacgtgccgctacgagctcggc
aacataagatgcctggctctcgagaaggttgccgagtcattagaggtttcgtgccaaaac
ctagggtgtcacgacattttcccgtactacagcaagctcaagcacgagcagcactgcagg
tttcgatcttacaactgtccttacgctggcgccgagtgctcggtgaccggagacattcct
accctcgtcgaccatctcaaagatgatcataaagtcgatatgcatagcggttgcactttc
aaccaccgttacgtcaagtcgaatcctcaagacgttgagaatgccacgtggatgctcacg
gtgttcaactgttttggaagacagttctgtttacactttgaggcgtttcagctggggacg
gcaccggtgtacatggcgtttctaaggttcatgggagacgagaacgaggctaagaagttt
agttacagcttggaagttggagctcacggccgtaagctgacgtggcaagggattccgaga
agcatcagagacggtcacaggaaggtccgtgatagtcaggacggactcatcatccctaga
aacatggctttgtacttttctggcagtgacaaagaagagctcaagttgagagtcactgga
cggatctggagagaggagtaa
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