Raphanus sativus (radish): 108844278
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Entry
108844278 CDS
T06014
Name
(RefSeq) protein BTR1 isoform X1
KO
K14944
RNA-binding protein Nova
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rsz03041
]
108844278
Spliceosome [BR:
rsz03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
108844278
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Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH_KhpA-B
KH-I_KHDC4-BBP
KH_NusA_2nd
KH_Vigilin
Motif
Other DBs
NCBI-GeneID:
108844278
NCBI-ProteinID:
XP_018473003
UniProt:
A0A6J0MLJ3
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Position
3:27749506..27752333
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AA seq
330 aa
AA seq
DB search
MESTESYAPPPEELTKPSPEPSEDDSGEKPTHIRFLVSNAAAGSVIGKGGSTITEFQAKS
GARIQLSRNQEFFPGTTDRIIMISGSIKEVVNGLELILDKLHSELHAEEGSDVEPRRRLR
LVVPNSSCGGIIGKGGATIKSFIEESKAGIKISPLDNTFYGLSDRLVTLSGTFEEQMRAI
DLILAKLTEDDHYSQNVHSPYSYAGLSYSGFHGHPYAYVLPFATAGYNSANYAHNGSGGR
YQNHQKEEAGRTVTIGVSDEHIGLVLGRGGRNIMEITQMTGARVKISDRGDFMSGTTDRK
VSITGSQRAIQQAETMIKQKVDSASERDTE
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggagtccaccgagtcatatgcccctcctcctgaagagctcaccaagccatcccctgaa
ccttccgaagatgactctggtgagaagccaacacacattcgtttccttgtatccaatgcg
gcggctggctccgtcattgggaaaggaggctccaccatcactgagtttcaggccaagtcc
ggtgcgcggatccagctctctcgtaaccaggagtttttccctgggacgaccgataggatt
atcatgatatctggctctatcaaagaagttgtcaatggacttgaacttatccttgataaa
ttgcacagcgagcttcatgctgaagagggtagtgatgttgagcctaggagacgactaaga
cttgtggttcctaacagttcttgtggaggcataattgggaaaggaggggccaccattaag
tcattcattgaggaatctaaagctggtattaagatatcccctctggataataccttctat
gggttgagtgataggctagtgacgttatctggaaccttcgaggagcagatgcgggctatt
gatttgattttggctaagcttaccgaggatgatcattactcccagaatgtgcattcccca
tattcatatgcaggtctttcctactctggttttcatggtcatccatatgcgtatgtgctt
ccttttgcaacagccggatacaattcagctaactatgcacacaacggttctggaggcagg
tatcaaaaccaccaaaaggaagaggctggtaggacggtgacaattggtgtgtcggatgag
catataggattggtgcttggtcgtggaggaagaaacatcatggaaatcactcagatgaca
ggtgcccgagtaaaaatatcagaccgaggcgatttcatgtctggaaccactgataggaaa
gtgagtatcacaggatcacagagagcaattcagcaagctgagacgatgataaaacagaaa
gttgattcagcctctgagagagacaccgaataa
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