Raphanus sativus (radish): 108844371
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Entry
108844371 CDS
T06014
Name
(RefSeq) transcription initiation factor IIB-1
KO
K03124
transcription initiation factor TFIIB
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
108844371
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rsz03021
]
108844371
Transcription machinery [BR:
rsz03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
108844371
Prokaryotic type
Archaeal type
TFB
108844371
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Ribosomal_S27e
Zn_ribbon_8
Motif
Other DBs
NCBI-GeneID:
108844371
NCBI-ProteinID:
XP_018473121
UniProt:
A0A6J0MRU3
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All DBs
Position
3:complement(14106111..14108279)
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AA seq
312 aa
AA seq
DB search
MSDAYCTDCKRETELVVDHSAGDTLCSECGLVLESHSIDETSEWRTFANESSNADPNRVG
GPTNPLLADSALTTVIAKTNGSSGDFLSNSLGRWQNRNGSAERGLIQAFKTIATMSDRLG
LVGTIKDRANEIFKRLEDQKSTRGRNQDALLAACLYISCRQEDKPRTIKEICSVANGATK
KEIGRAKDFIVKTLGLETGHSVELGAIHAGDFMKRFCSNLGMSHQAVRAAEEAVKKSEEF
DIRRSPISIAAVVIYIITQLSDDKKPLKDIAVATGVAEGTIRNSYKDLYPHLPKIIPSWY
AKEEDLKNLSSP
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacgcctactgcacggattgcaagagggagacggagctggtggtggatcactcc
gccggagacacgctctgctccgagtgcggcctcgttctcgagtcccactccatcgacgag
acctccgagtggcgtaccttcgccaacgagtcttccaacgccgatcccaaccgtgtcggc
ggtcccaccaaccctctcctcgccgacagcgccctcaccaccgtcatcgccaagaccaac
ggctcctccggcgatttcttgtctaactctctcgggaggtggcagaatcgtaacggtagt
gctgagcgtgggttgatccaggcgtttaagacaattgccaccatgtccgacaggttgggg
cttgtcggaactatcaaggatcgggctaatgagatatttaagaggctggaggatcaaaag
tcaaccaggggaagaaaccaggatgcacttttggcagcctgcttgtacatttcttgtaga
caagaggacaagccacggactattaaggaaatttgctctgttgccaatggggcgacaaag
aaggaaattggacgagcgaaggactttattgttaagacgttggggcttgagactggccat
tctgtggaattgggcgctatacatgctggtgacttcatgaaaaggttctgctctaacctt
ggaatgtctcatcaagccgttagagctgctgaggaagctgtgaaaaaatctgaggaattt
gatataaggaggagtcctatatcaatagcagcagttgttatctatatcataacccagctt
tctgatgataagaagcctctcaaagatatagcggtggctacaggagtagcagaggggaca
ataagaaactcatacaaggacttgtatcctcatctaccaaagatcataccaagttggtat
gctaaggaagaggatcttaagaacctctcaagtccttga
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