Raphanus sativus (radish): 108844447
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Entry
108844447 CDS
T06014
Name
(RefSeq) putative RING-H2 finger protein ATL50
KO
K22378
E3 ubiquitin-protein ligase RNF181 [EC:
2.3.2.27
]
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rsz04121
]
108844447
Enzymes [BR:
rsz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108844447
Ubiquitin system [BR:
rsz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108844447
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-RING_5
zf-C3HC4_3
zf-ANAPC11
zf-C3HC4_4
zf_RING_Vps8
zinc_ribbon_16
zf-RING_16
RING_XB3-XBAT31
zf-RING_Vps41
zf-Nse
Motif
Other DBs
NCBI-GeneID:
108844447
NCBI-ProteinID:
XP_018473211
UniProt:
A0A6J0MNW8
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All DBs
Position
1:complement(8270679..8271409)
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AA seq
225 aa
AA seq
DB search
MKRKLSHVIDNYPEPDDAGTIRVTARIFGQDANSTFTTVAFADDFLDEENDECISKEDLN
YFLMDAEIEQDVIFDALADLDDYVYEVTCPTSTEYSPGSLLKVRLDLVPDYLEVDDDDAD
AEIEEAAQVSFDDTSNIRFRPASKLVVKSLPRKIYNKKTEEEKRKNKKMICLEECSICLQ
EFTNGGKVVTLSCGHEFDDECIVKWFETGHVCPLCRLELPCDDEI
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgcaaactatcccacgtaatcgataactaccctgaaccagacgatgcgggcaca
atcagagtcacggcaaggatctttggccaagatgctaactcgacgttcacgactgtggcg
tttgccgacgacttcctagatgaggagaacgacgagtgtataagcaaagaagacttgaac
tacttcttgatggatgccgaaatcgagcaagatgttatctttgatgcgctagcagaccta
gatgactatgtttatgaggtaacttgccccacaagtactgagtattctcctgggtctctt
ttgaaagttcggttggatcttgttcctgattatctcgaagttgatgacgatgacgctgac
gctgagattgaagaagctgctcaagtctcgtttgatgataccagcaatatccggtttcga
ccagctagcaagctcgtggtcaagtcgctacctaggaaaatatacaacaagaagactgaa
gaggaaaagagaaagaacaagaagatgatttgcttagaagagtgcagcatttgtttgcaa
gagtttaccaatggaggaaaagttgtgactttatcttgtggacatgagtttgacgatgag
tgtatcgtaaagtggtttgagactggtcatgtttgtccattgtgtcgtctcgagttaccg
tgtgatgatgaaatatag
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