KEGG   Raphanus sativus (radish): 108844451
Entry
108844451         CDS       T06014                                 
Name
(RefSeq) ubiquitin-40S ribosomal protein S27a-3
  KO
K02977  ubiquitin-small subunit ribosomal protein S27Ae
Organism
rsz  Raphanus sativus (radish)
Pathway
rsz03010  Ribosome
rsz04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    108844451
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    108844451
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:rsz03011]
    108844451
   04121 Ubiquitin system [BR:rsz04121]
    108844451
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rsz04147]
    108844451
Ribosome [BR:rsz03011]
 Ribosomal proteins
  Eukaryotes
   Small subunit
    108844451
  Archaea
    108844451
Ubiquitin system [BR:rsz04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   108844451
Exosome [BR:rsz04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   108844451
  Exosomal proteins of colorectal cancer cells
   108844451
SSDB
Motif
Pfam: ubiquitin Ribosomal_S27 Rad60-SLD Ubiquitin_2 Rad60-SLD_2 Dsc3_N Plexin_RBD TBK1_ULD Ubiquitin_5 UBL_UBAC1 DUF2604 Thioredox_PDIA6_C OTU1_UBXL
Other DBs
NCBI-GeneID: 108844451
NCBI-ProteinID: XP_018473212
UniProt: A0A6J0ML39
LinkDB
Position
Unknown
AA seq 157 aa
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKHKKVKLAVLQFYKVDGSGKVQRLRKE
CPNATCGAGTFMASHFDRHYCGKCGLTYVYQKEGAEA
NT seq 474 nt   +upstreamnt  +downstreamnt
atgcagatcttcgtgaaaaccctaacggggaagacaatcaccctcgaggtcgagtcctcc
gacaccatcgacaatgtcaaggccaagatccaggacaaggaaggcatccctccggaccag
cagcgactgatcttcgccggaaagcagctggaggacgggcgcaccctcgccgactacaac
atccagaaggagtctactctccacctcgtcctccgtctccgcggtggcgccaagaagagg
aagaagaagacgtacaccaagcccaagaagatcaagcacaagcacaagaaggtgaagctc
gccgtgctccagttctacaaggttgatggctccggcaaggtccagcgtctcaggaaggag
tgccctaacgcaacgtgtggcgcgggaacgttcatggctagccatttcgaccgtcactac
tgtggtaagtgtggtctcacttacgtttaccagaaagaaggcgccgaagcatga

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